RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-208ENST00000465627 HNRNPLP14866 589 aaKnown RBP eCLIP8.84□□□□□ -0.99
UBA3-208ENST00000465627 GRIA4P48058 902 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 ARSDP51689 593 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 SNRPD1P62314 119 aaKnown RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 MGAT5Q09328 741 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 IFFO1Q0D2I5 559 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 NR1H3Q13133 447 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 NAB1Q13506 487 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 HNRNPA1L2Q32P51 320 aaKnown RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 C9orf64Q5T6V5 341 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 TEDDM1Q5T9Z0 273 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 CASC4Q6P4E1 433 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 BRICD5Q6PL45 260 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 TRABD2AQ86V40 505 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 EXOC3L1Q86VI1 746 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 LRRC6Q86X45 466 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 UBALD2Q8IYN6 164 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 KRT222Q8N1A0 295 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.84□□□□□ -0.99
UBA3-208ENST00000465627 PPHLN1Q8NEY8 458 aaKnown RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 ZNF669Q96BR6 464 aaPredicted RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 IFT43Q96FT9 208 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 SGSM3Q96HU1 749 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 ZNF641Q96N77 438 aaPredicted RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 MCCC1Q96RQ3 725 aaPredicted RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 CCDC77Q9BR77 488 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 MAGEE1Q9HCI5 957 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 PRDM9Q9NQV7 894 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 SAMD15Q9P1V8 674 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 SLC17A6Q9P2U8 582 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 PSMC3IPQ9P2W1 217 aaPredicted RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 HECAQ9UBI9 543 aaPredicted RBP8.84□□□□□ -0.99
UBA3-208ENST00000465627 GGT7Q9UJ14 662 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 SORCS3Q9UPU3 1222 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 KCTD3Q9Y597 815 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 PSAT1Q9Y617 370 aa8.84□□□□□ -0.99
UBA3-208ENST00000465627 SPTAN1Q13813 2472 aaKnown RBP8.83□□□□□ -1
UBA3-208ENST00000465627 A0A0J9YYE9 177 aa8.83□□□□□ -1
UBA3-208ENST00000465627 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.83□□□□□ -1
UBA3-208ENST00000465627 POC1B-GALNT4F8VUJ3 575 aa8.83□□□□□ -1
UBA3-208ENST00000465627 K7EQS6 105 aa8.83□□□□□ -1
UBA3-208ENST00000465627 SLC7A4O43246 635 aa8.83□□□□□ -1
UBA3-208ENST00000465627 KAT7O95251 611 aa8.83□□□□□ -1
UBA3-208ENST00000465627 TRBC1P01850 177 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ERVK-10P10266 1014 aa8.83□□□□□ -1
UBA3-208ENST00000465627 CREB1P16220 341 aa8.83□□□□□ -1
UBA3-208ENST00000465627 GABRB3P28472 473 aa8.83□□□□□ -1
UBA3-208ENST00000465627 SLC8A1P32418 973 aa8.83□□□□□ -1
UBA3-208ENST00000465627 GRIA2P42262 883 aa8.83□□□□□ -1
UBA3-208ENST00000465627 KIR2DL1P43626 348 aaPredicted RBP8.83□□□□□ -1
UBA3-208ENST00000465627 SOX9P48436 509 aa8.83□□□□□ -1
UBA3-208ENST00000465627 KDSRQ06136 332 aa8.83□□□□□ -1
UBA3-208ENST00000465627 BCL2L1Q07817 233 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ZNF234Q14588 700 aa8.83□□□□□ -1
UBA3-208ENST00000465627 GRM3Q14832 879 aa8.83□□□□□ -1
UBA3-208ENST00000465627 TAF1AQ15573 450 aaPredicted RBP8.83□□□□□ -1
UBA3-208ENST00000465627 CCDC6Q16204 474 aa8.83□□□□□ -1
UBA3-208ENST00000465627 CNGA3Q16281 694 aa8.83□□□□□ -1
UBA3-208ENST00000465627 KCTD16Q68DU8 428 aa8.83□□□□□ -1
UBA3-208ENST00000465627 TXNDC11Q6PKC3 985 aa8.83□□□□□ -1
UBA3-208ENST00000465627 PACS1Q6VY07 963 aa8.83□□□□□ -1
UBA3-208ENST00000465627 TIFABQ6ZNK6 161 aa8.83□□□□□ -1
UBA3-208ENST00000465627 NLRP9Q7RTR0 991 aa8.83□□□□□ -1
UBA3-208ENST00000465627 SLC26A11Q86WA9 606 aa8.83□□□□□ -1
UBA3-208ENST00000465627 YAF2Q8IY57 180 aa8.83□□□□□ -1
UBA3-208ENST00000465627 CBARPQ8N350 705 aaPredicted RBP8.83□□□□□ -1
UBA3-208ENST00000465627 SLC44A3Q8N4M1 653 aa8.83□□□□□ -1
UBA3-208ENST00000465627 TTC8Q8TAM2 541 aa8.83□□□□□ -1
UBA3-208ENST00000465627 HCAR2Q8TDS4 363 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ISL2Q96A47 359 aa8.83□□□□□ -1
UBA3-208ENST00000465627 LRIG1Q96JA1 1093 aa8.83□□□□□ -1
UBA3-208ENST00000465627 RUFY1Q96T51 708 aa8.83□□□□□ -1
UBA3-208ENST00000465627 FAM129BQ96TA1 746 aa8.83□□□□□ -1
UBA3-208ENST00000465627 AGAP2Q99490 1192 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ADGRE3Q9BY15 652 aa8.83□□□□□ -1
UBA3-208ENST00000465627 MTG2Q9H4K7 406 aa8.83□□□□□ -1
UBA3-208ENST00000465627 SUV39H2Q9H5I1 410 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ATP13A3Q9H7F0 1226 aa8.83□□□□□ -1
UBA3-208ENST00000465627 KCNK12Q9HB15 430 aa8.83□□□□□ -1
UBA3-208ENST00000465627 CD248Q9HCU0 757 aa8.83□□□□□ -1
UBA3-208ENST00000465627 NLE1Q9NVX2 485 aaPredicted RBP8.83□□□□□ -1
UBA3-208ENST00000465627 IL1RAPL1Q9NZN1 696 aa8.83□□□□□ -1
UBA3-208ENST00000465627 IL17CQ9P0M4 197 aa8.83□□□□□ -1
UBA3-208ENST00000465627 THAP10Q9P2Z0 257 aaPredicted RBP8.83□□□□□ -1
UBA3-208ENST00000465627 DKK3Q9UBP4 350 aa8.83□□□□□ -1
UBA3-208ENST00000465627 PCDHB9Q9Y5E1 797 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ACTL7BQ9Y614 415 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ARL5AQ9Y689 179 aa8.83□□□□□ -1
UBA3-208ENST00000465627 ASXL3Q9C0F0 2248 aa8.82□□□□□ -1
UBA3-208ENST00000465627 TLDC2A0PJX2 215 aa8.82□□□□□ -1
UBA3-208ENST00000465627 CAPN8A6NHC0 703 aa8.82□□□□□ -1
UBA3-208ENST00000465627 SMIM23A6NLE4 172 aa8.82□□□□□ -1
UBA3-208ENST00000465627 H7C0S8 307 aa8.82□□□□□ -1
UBA3-208ENST00000465627 GAPDHSO14556 408 aaPredicted RBP8.82□□□□□ -1
UBA3-208ENST00000465627 RGS16O15492 202 aaPredicted RBP8.82□□□□□ -1
UBA3-208ENST00000465627 SPINT1O43278 529 aa8.82□□□□□ -1
UBA3-208ENST00000465627 ASGR2P07307 311 aa8.82□□□□□ -1
UBA3-208ENST00000465627 PIRTP0C851 137 aa8.82□□□□□ -1
UBA3-208ENST00000465627 SERPINA4P29622 427 aa8.82□□□□□ -1
UBA3-208ENST00000465627 CTHP32929 405 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms