RNA–Protein interactions for RNA: ENST00000464539.1

TNRC6A-205, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 1,853 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-205ENST00000464539 KRT6AP02538 564 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 KRT6BP04259 564 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 IL12AP29459 219 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 YAP1P46937 504 aaKnown RBP11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 MAPK10P53779 464 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 GJA9P57773 515 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 PRKCEQ02156 737 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 DNASE1L3Q13609 305 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 USP10Q14694 798 aaKnown RBP11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 UGP2Q16851 508 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 ZNF181Q2M3W8 571 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 RAB6CQ53S08 254 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 TJAP1Q5JTD0 557 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 LDLRAP1Q5SW96 308 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 PRSS48Q7RTY5 328 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 C11orf74Q86VG3 221 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 KCNMB4Q86W47 210 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 ZDHHC17Q8IUH5 632 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 PSTKQ8IV42 348 aaKnown RBP11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 KIAA2013Q8IYS2 634 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 C8orf59Q8N0T1 100 aaPredicted RBP11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 CCNYL1Q8N7R7 359 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 OR7A2PQ8NGA2 310 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 RHOXF1Q8NHV9 184 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 TSPEARQ8WU66 669 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 FAM122AQ96E09 287 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 ELMO2Q96JJ3 720 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 SNX18Q96RF0 628 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 AGAP2Q99490 1192 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 RAB6CQ9H0N0 254 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 CASS4Q9NQ75 786 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 KLQ9UEF7 1012 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 ZNF229Q9UJW7 825 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 CPSF3Q9UKF6 684 aaKnown RBP11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 NAALAD2Q9Y3Q0 740 aa11.53□□□□□ -0.56
TNRC6A-205ENST00000464539 TYW5A2RUC4 315 aaKnown RBP11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 EVPLLA8MZ36 301 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 NDUFS2O75306 463 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 KATNA1O75449 491 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ENO2P09104 434 aaPredicted RBP11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 HTR1BP28222 390 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ELK4P28324 431 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ATICP31939 592 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 BMPR1AP36894 532 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 GRIK1P39086 918 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 CAP2P40123 477 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ALDH3A2P51648 485 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 EFNA5P52803 228 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 SLC6A3Q01959 620 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 LAMC2Q13753 1193 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 GRM3Q14832 879 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 POLD3Q15054 466 aaPredicted RBP11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ACOX1Q15067 660 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 CYP51A1Q16850 503 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 LRRC26Q2I0M4 334 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 MTERF2Q49AM1 385 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 PAGE2BQ5JRK9 111 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 NCBP2-AS2Q69YL0 99 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 LCLAT1Q6UWP7 414 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 CES3Q6UWW8 571 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 USP43Q70EL4 1123 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 CHST15Q7LFX5 561 aaPredicted RBP11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 DSG4Q86SJ6 1040 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ZBTB46Q86UZ6 589 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ZC3HC1Q86WB0 502 aaKnown RBP11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ATL1Q8WXF7 558 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 ATXN7L3BQ96GX2 97 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 CSPG4P5Q96PW8 444 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 MRPL4Q9BYD3 311 aaKnown RBP11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 PXMP2Q9NR77 195 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.52□□□□□ -0.579e-6■□□□□ 9.2
TNRC6A-205ENST00000464539 GTSE1Q9NYZ3 720 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 GJD2Q9UKL4 321 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 VANGL2Q9ULK5 521 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 HES2Q9Y543 173 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 SMCHD1A6NHR9 2005 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 CROCCQ5TZA2 2017 aa11.52□□□□□ -0.57
TNRC6A-205ENST00000464539 A0A087X1B8 175 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 TCRBV5S2A0A599 114 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 ZNF99A8MXY4 864 aaPredicted RBP11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 TAF4O00268 1085 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 ARPC2O15144 300 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 IDH3BO43837 385 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 ALX3O95076 343 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 AP2A1O95782 977 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 KRT19P08727 400 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 HOXC6P09630 235 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 BMP4P12644 408 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 FOSL2P15408 326 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 GPX3P22352 226 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 TNFSF9P41273 254 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 TFAMQ00059 246 aaKnown RBP11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 PRPSAP1Q14558 356 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 CRY1Q16526 586 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 FAM209AQ5JX71 171 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 C6orf141Q5SZD1 244 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 FAM182AQ5T1J6 154 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 BSPRYQ5W0U4 402 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 BTBD8Q5XKL5 378 aa11.51□□□□□ -0.57
TNRC6A-205ENST00000464539 CNSTQ6PJW8 725 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms