RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 APLFQ8IW19 511 aaPredicted RBP21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 SHKBP1Q8TBC3 707 aa21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 STMN2Q93045 179 aa21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 TCF12Q99081 682 aa21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 ZNF106Q9H2Y7 1883 aaKnown RBP21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 POPDC3Q9HBV1 291 aa21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 TLR9Q9NR96 1032 aa21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 HCFC1R1Q9NWW0 138 aa21.73■■□□□ 1.07
PDLIM2-216ENST00000464275 SPECC1L-ADORA2AF8WAN1 911 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 MT-CO1P00395 513 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 PTPN2P17706 415 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 CCR2P41597 374 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 ABL2P42684 1182 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 PLK1P53350 603 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 NAGLUP54802 743 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 PFKPQ01813 784 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 CCDC6Q16204 474 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 ATXN7L2Q5T6C5 722 aaPredicted RBP21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 C6orf163Q5TEZ5 329 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 ZNF549Q6P9A3 640 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 RINLQ6ZS11 566 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 CCDC126Q96EE4 140 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 PLK2Q9NYY3 685 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 NPHS1O60500 1241 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 PGM1P36871 562 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 CSNK1DP48730 415 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 UBE3AQ05086 875 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 CFAP157Q5JU67 520 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 TTC30BQ8N4P2 665 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 EFHBQ8N7U6 833 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 SH3RF2Q8TEC5 729 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 SMIM14Q96QK8 99 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 AARSD1Q9BTE6 412 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 CCDC106Q9BWC9 280 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 UNKQ9C0B0 810 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 ARMCX1Q9P291 453 aa21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 STX18Q9P2W9 335 aaKnown RBP21.72■■□□□ 1.07
PDLIM2-216ENST00000464275 CXorf51AA0A1B0GTR3 108 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 SNUPNO95149 360 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 CSPG5O95196 566 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 SUOXP51687 545 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 EPHB1P54762 984 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 ALDH18A1P54886 795 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 PRKAA1Q13131 559 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 PLEKHG6Q3KR16 790 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 KHDC1Q4VXA5 237 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 ARHGAP15Q53QZ3 475 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 NET1Q7Z628 596 aaPredicted RBP21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 KCNV2Q8TDN2 545 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 DNAJC9Q8WXX5 260 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 SMG9Q9H0W8 520 aaKnown RBP21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 ABCB8Q9NUT2 735 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 CLEC4EQ9ULY5 219 aa21.71■■□□□ 1.07
PDLIM2-216ENST00000464275 K7ERQ8 282 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 STX7O15400 261 aaKnown RBP21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 PIGNO95427 931 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 PSMG1O95456 288 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 SLC4A1P02730 911 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 AOC1P19801 751 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 MAPK8P45983 427 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 C1QTNF8P60827 252 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 SLC34A1Q06495 639 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 USP4Q13107 963 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 TRMT5Q32P41 509 aaKnown RBP21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 ARMC12Q5T9G4 340 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 EPGNQ6UW88 154 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 TMEM207Q6UWW9 146 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 CMTM8Q8IZV2 173 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 TXNDC5Q8NBS9 432 aaKnown RBP21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 ANKRD49Q8WVL7 239 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 MYO19Q96H55 970 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 MAN1C1Q9NR34 630 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 POLR3BQ9NW08 1133 aaPredicted RBP21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 VPS9D1Q9Y2B5 631 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 PCDHB9Q9Y5E1 797 aa21.7■■□□□ 1.07
PDLIM2-216ENST00000464275 B2RBV5 119 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 SMAD6O43541 496 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 PGLSO95336 258 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 CHRNGP07510 517 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 CD70P32970 193 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 SERPINB5P36952 375 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 RPL14P50914 215 aaKnown RBP21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 ACSBG2Q5FVE4 666 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 ARL13AQ5H913 290 aaPredicted RBP21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 MICAL1Q8TDZ2 1067 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 SGF29Q96ES7 293 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 TM6SF2Q9BZW4 377 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 POMKQ9H5K3 350 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 COG4Q9H9E3 785 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 MAGEE1Q9HCI5 957 aa21.7■■□□□ 1.06
PDLIM2-216ENST00000464275 SOBPA7XYQ1 873 aa21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 H7C0S8 307 aa21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 PFDN6O15212 129 aa21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 NVLO15381 856 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 NDUFS3O75489 264 aa21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 CIB2O75838 187 aa21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 MPSTP25325 297 aa21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 RPL26P61254 145 aaKnown RBP21.69■■□□□ 1.06
PDLIM2-216ENST00000464275 MRPS35P82673 323 aaKnown RBP21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms