RNA–Protein interactions for RNA: ENST00000462129.1

RER1-206, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 2

Gene RER1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-206ENST00000462129 CD68P34810 354 aaPredicted RBP18.06■□□□□ 0.48
RER1-206ENST00000462129 RPL26P61254 145 aaKnown RBP18.06■□□□□ 0.48
RER1-206ENST00000462129 RACK1P63244 317 aaKnown RBP18.06■□□□□ 0.48
RER1-206ENST00000462129 BASP1P80723 227 aaKnown RBP18.06■□□□□ 0.48
RER1-206ENST00000462129 DR1Q01658 176 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 TRAF2Q12933 501 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 TARDBPQ13148 414 aaKnown RBP eCLIP18.06■□□□□ 0.48
RER1-206ENST00000462129 DHX34Q14147 1143 aaKnown RBP18.06■□□□□ 0.48
RER1-206ENST00000462129 MAATS1Q7Z4T9 603 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 AADATQ8N5Z0 425 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 CEP112Q8N8E3 955 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 LPCAT1Q8NF37 534 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 TDRD1Q9BXT4 1180 aaKnown RBP18.06■□□□□ 0.48
RER1-206ENST00000462129 NEUROG2Q9H2A3 272 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 KDM4CQ9H3R0 1056 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 RAB6BQ9NRW1 208 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 ASIC3Q9UHC3 531 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 PCYOX1Q9UHG3 505 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 RPL26L1Q9UNX3 145 aaKnown RBP18.06■□□□□ 0.48
RER1-206ENST00000462129 CHKBQ9Y259 395 aa18.06■□□□□ 0.48
RER1-206ENST00000462129 PLXNA2O75051 1894 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 TSPAN11A1L157 253 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 CTAGE15A4D2H0 777 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 PDE2AO00408 941 aaPredicted RBP18.05■□□□□ 0.48
RER1-206ENST00000462129 HTRA2O43464 458 aaPredicted RBP18.05■□□□□ 0.48
RER1-206ENST00000462129 CTAGE8P0CG41 777 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 C7P10643 843 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 CYP2A6P11509 494 aaPredicted RBP18.05■□□□□ 0.48
RER1-206ENST00000462129 DRD3P35462 400 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 ACADVLP49748 655 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 VPS41P49754 854 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 CDK18Q07002 472 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 UGP2Q16851 508 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 TTC27Q6P3X3 843 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 KDELC2Q7Z4H8 507 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 ZNF605Q86T29 641 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 PRPF39Q86UA1 669 aaKnown RBP18.05■□□□□ 0.48
RER1-206ENST00000462129 CTAGE6Q86UF2 777 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 CTAGE4Q8IX94 777 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 ZNF843Q8N446 348 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 TAB3Q8N5C8 712 aaPredicted RBP18.05■□□□□ 0.48
RER1-206ENST00000462129 EID2Q8N6I1 236 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 SKA1Q96BD8 255 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 FEM1CQ96JP0 617 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 KRT12Q99456 494 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 LRRC40Q9H9A6 602 aa18.05■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3DA0A087WVF3 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3IA0A087WXS9 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3EA0A087X179 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3KA0A087X1G2 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 A0A1W2PPC4 97 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3FA6NER0 549 aaPredicted RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 ERI2A8K979 691 aaKnown RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3LB9A6J9 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TRAFD1O14545 582 aaPredicted RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 PCDH8O95206 1070 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 MMP2P08253 660 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 C1SP09871 688 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3HP0C7X1 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 CDK4P11802 303 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 METAP1P53582 386 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 WNT3AP56704 352 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 C2orf54Q08AI8 447 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 GPS1Q13098 491 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 SHBQ15464 509 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TRIP13Q15645 432 aaPredicted RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 FAXCQ5TGI0 409 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 AGBL4Q5VU57 503 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3GQ6DHY5 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3CQ6IPX1 549 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 NAPEPLDQ6IQ20 393 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TBC1D3Q8IZP1 549 aaPredicted RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 LSM14AQ8ND56 463 aaKnown RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 OR2T34Q8NGX1 318 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 SNIP1Q8TAD8 396 aaKnown RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 CXorf40AQ8TE69 158 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 ECHDC3Q96DC8 303 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 SRPK1Q96SB4 655 aaKnown RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 NRSN2Q9GZP1 204 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 PREBQ9HCU5 417 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 AASDHPPTQ9NRN7 309 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 SERGEFQ9UGK8 458 aa18.04■□□□□ 0.48
RER1-206ENST00000462129 TPX2Q9ULW0 747 aaKnown RBP18.04■□□□□ 0.48
RER1-206ENST00000462129 NDC80O14777 642 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 TSPAN6O43657 245 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 PLRG1O43660 514 aaKnown RBP18.03■□□□□ 0.48
RER1-206ENST00000462129 AP1G1O43747 822 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 NDST3O95803 873 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 WNT1P04628 370 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 ZSCAN5DPP0CG00 497 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 ETS1P14921 441 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 HLA-DPA1P20036 260 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 RPL22P35268 128 aaKnown RBP18.03■□□□□ 0.48
RER1-206ENST00000462129 ADPRHP54922 357 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 SARNPP82979 210 aaKnown RBP18.03■□□□□ 0.48
RER1-206ENST00000462129 ARHGEF7Q14155 803 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 RTP5Q14D33 572 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 FAM182AQ5T1J6 154 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 PIP5KL1Q5T9C9 394 aa18.03■□□□□ 0.48
RER1-206ENST00000462129 PPP1R21Q6ZMI0 780 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms