RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KIFC3Q9BVG8 833 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 MXD3Q9BW11 206 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 C1QTNF5Q9BXJ0 243 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 QTRT1Q9BXR0 403 aaKnown RBP3.1□□□□□ -1.91
HDAC6-212ENST00000461608 HRH4Q9H3N8 390 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 PLK3Q9H4B4 646 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 RABEP2Q9H5N1 569 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 DDX4Q9NQI0 724 aaKnown RBP3.1□□□□□ -1.91
HDAC6-212ENST00000461608 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.1□□□□□ -1.91
HDAC6-212ENST00000461608 NENFQ9UMX5 172 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 LSM4Q9Y4Z0 139 aaKnown RBP3.1□□□□□ -1.91
HDAC6-212ENST00000461608 CEPT1Q9Y6K0 416 aa3.1□□□□□ -1.91
HDAC6-212ENST00000461608 IGLV5-39A0A0G2JS06 123 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 CTDSP2O14595 271 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ADAM10O14672 748 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 OGG1O15527 345 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ASAP2O43150 1006 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ERAL1O75616 437 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 RGS11O94810 467 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 TPPPO94811 219 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 SOX30O94993 753 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 IL7RP16871 459 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 EEF1DP29692 281 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 CXCR3P49682 368 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ARSEP51690 589 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 STAT2P52630 851 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 PMS2P54278 862 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 RRP1P56182 461 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 TMPRSS3P57727 454 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 SORDQ00796 357 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 POU5F1Q01860 360 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ROR2Q01974 943 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 PRPF4BQ13523 1007 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 GPR18Q14330 331 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 RASA2Q15283 850 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 TCP11X2Q5H9J9 407 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 SPECC1Q5M775 1068 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 DNTTIP2Q5QJE6 756 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 GARNL3Q5VVW2 1013 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 FRG2Q64ET8 278 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 SLC16A12Q6ZSM3 486 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 SHFQ7M4L6 423 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 NOXA1Q86UR1 476 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 GPSM1Q86YR5 675 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 SRRM1Q8IYB3 904 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 AVL9Q8NBF6 648 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ENGASEQ8NFI3 743 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 MAGEC3Q8TD91 643 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 SCARB1Q8WTV0 552 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 TRIB2Q92519 343 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 RPL36ALQ969Q0 106 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ZNF653Q96CK0 615 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ELMOD3Q96FG2 381 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 OR2A14Q96R47 310 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 MSTO1Q9BUK6 570 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 AP1M1Q9BXS5 423 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 TKTL2Q9H0I9 626 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 ISCUQ9H1K1 167 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 PDE7BQ9NP56 450 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 MKKSQ9NPJ1 570 aaPredicted RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 HINT3Q9NQE9 182 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 TMEM51Q9NW97 253 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 NFKBIL1Q9UBC1 381 aaPredicted RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 HEY2Q9UBP5 337 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 PPIEQ9UNP9 301 aaKnown RBP3.09□□□□□ -1.91
HDAC6-212ENST00000461608 COG5Q9UP83 839 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 BTBD3Q9Y2F9 522 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 CMAHPQ9Y471 501 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 FAM169AQ9Y6X4 670 aa3.09□□□□□ -1.91
HDAC6-212ENST00000461608 TMEM272A0A1B0GTI8 110 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 OR2A25A4D2G3 310 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GOLGA6L9A6NEM1 432 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CGB1A6NKQ9 187 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 KDM4EB2RXH2 506 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SH2B2O14492 632 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SOCS2O14508 198 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 LDB2O43679 373 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ENTPD3O75355 529 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GJB3O75712 270 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE7O76087 117 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 NDUFB8O95169 186 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 TPOP07202 933 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ABCB1P08183 1280 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE12FP0CL80 117 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE12GP0CL81 117 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE12IP0CL82 117 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 VPREB1P12018 145 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 NAGAP17050 411 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 ACADLP28330 430 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 RFX2P48378 723 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 LIG4P49917 911 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 HSD17B4P51659 736 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GPR143P51810 404 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 IFI35P80217 286 aaPredicted RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 CXCL9Q07325 125 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SRSF4Q08170 494 aaKnown RBP3.08□□□□□ -1.92
HDAC6-212ENST00000461608 SREBF2Q12772 1141 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE1Q13065 139 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 GAGE4Q13068 117 aa3.08□□□□□ -1.92
HDAC6-212ENST00000461608 LAMB3Q13751 1172 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms