RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 ERVK13-1Q9NX77 482 aa5.72□□□□□ -1.49
PTPN12-209ENST00000460731 SAE1Q9UBE0 346 aaPredicted RBP5.72□□□□□ -1.49
PTPN12-209ENST00000460731 SLCO3A1Q9UIG8 710 aa5.72□□□□□ -1.49
PTPN12-209ENST00000460731 ERVW-1Q9UQF0 538 aa5.72□□□□□ -1.49
PTPN12-209ENST00000460731 R3HDM2Q9Y2K5 976 aaKnown RBP5.72□□□□□ -1.49
PTPN12-209ENST00000460731 ATP8A1Q9Y2Q0 1164 aa5.72□□□□□ -1.49
PTPN12-209ENST00000460731 SHROOM3Q8TF72 1996 aa5.71□□□□□ -1.49
PTPN12-209ENST00000460731 WDR87Q6ZQQ6 2873 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 NYNRINQ9P2P1 1898 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 MUC22E2RYF6 1773 aaPredicted RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 A0A1W2PQF6 199 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 ANTXRLA6NF34 631 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 C5orf60A6NFR6 353 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 NUDT19A8MXV4 375 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 J3KR12 359 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 MCF2LO15068 1137 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 ZNF185O15231 689 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SMAD6O43541 496 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 LIASO43766 372 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CEP104O60308 925 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SNAP91O60641 907 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 GCATO75600 419 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 PRAMEF1O95521 474 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 FGGP02679 453 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 PLA2G1BP04054 148 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 ITGAVP06756 1048 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 MSL3P1P0C860 447 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SRCP12931 536 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 TNNT1P13805 278 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CCNB1P14635 433 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 POLR2EP19388 210 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 AOC1P19801 751 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CD72P21854 359 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CASQ1P31415 396 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CXCR5P32302 372 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 HSPA9P38646 679 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 LIMS1P48059 325 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SERPINH1P50454 418 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 RENBPP51606 427 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 OTUD4Q01804 1114 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SLC10A7Q0GE19 358 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 WASHC5Q12768 1159 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 ZNF234Q14588 700 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 IHHQ14623 411 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CYTH1Q15438 398 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 TEX44Q53QW1 395 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 C2orf27AQ580R0 203 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SLC45A4Q5BKX6 768 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 C9orf64Q5T6V5 341 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 EMC10Q5UCC4 262 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CWF19L1Q69YN2 538 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 TIGD7Q6NT04 549 aaPredicted RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 NPNTQ6UXI9 565 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 ARHGAP36Q6ZRI8 547 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SYT13Q7L8C5 426 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 RFX6Q8HWS3 928 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CCDC117Q8IWD4 279 aaPredicted RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 PHACTR4Q8IZ21 702 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SPEM1Q8N4L4 309 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 PCDH20Q8N6Y1 951 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 TTC8Q8TAM2 541 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 HCAR2Q8TDS4 363 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 UCMAQ8WVF2 138 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 NELL1Q92832 810 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 PTPRN2Q92932 1015 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CELF6Q96J87 481 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 LRIG1Q96JA1 1093 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 MS4A14Q96JA4 679 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 TEKT5Q96M29 485 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 QKIQ96PU8 341 aaKnown RBP eCLIP5.71□□□□□ -1.53e-8■■■■■ 86.6
PTPN12-209ENST00000460731 RBM15Q96T37 977 aaKnown RBP eCLIP5.71□□□□□ -1.54e-7■□□□□ 8.3
PTPN12-209ENST00000460731 LGMNQ99538 433 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 MGME1Q9BQP7 344 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CPEB1Q9BZB8 566 aaKnown RBP5.71□□□□□ -1.5
PTPN12-209ENST00000460731 L2HGDHQ9H9P8 463 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 TBC1D17Q9HA65 648 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 LMAN1LQ9HAT1 526 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 PCYOX1Q9UHG3 505 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 CDC23Q9UJX2 597 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 VPS28Q9UK41 221 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 TRHDEQ9UKU6 1024 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 HPCAL4Q9UM19 191 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 PLA2G4CQ9UP65 541 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 SIT1Q9Y3P8 196 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 GPR179Q6PRD1 2367 aa5.71□□□□□ -1.5
PTPN12-209ENST00000460731 MUC6Q6W4X9 2439 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 CCDC163A0A0D9SF12 145 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 A0A1B0GTL3 188 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 SH3D21A4FU49 640 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 CFAP69A5D8W1 941 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 TMEM221A6NGB7 291 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 K7ERQ8 282 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 M0R296 226 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 CBX4O00257 560 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 PGRMC1O00264 195 aaKnown RBP5.7□□□□□ -1.5
PTPN12-209ENST00000460731 PPP1R12AO14974 1030 aaPredicted RBP5.7□□□□□ -1.5
PTPN12-209ENST00000460731 MUSKO15146 869 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 ALOX15BO15296 676 aa5.7□□□□□ -1.5
PTPN12-209ENST00000460731 HTRA2O43464 458 aaPredicted RBP5.7□□□□□ -1.5
PTPN12-209ENST00000460731 PI15O43692 258 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms