RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 GPR1P46091 355 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 WNT3AP56704 352 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 SRP54P61011 504 aaKnown RBP16.13■□□□□ 0.17
CD28-203ENST00000458610 KLF1Q13351 362 aaPredicted RBP16.13■□□□□ 0.17
CD28-203ENST00000458610 GALNT3Q14435 633 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 ELOCQ15369 112 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 ANKRD20A2Q5SQ80 823 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 ANKRD20A1Q5TYW2 823 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 ANKRD20A3Q5VUR7 823 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 KANSL1Q7Z3B3 1105 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 SLC13A5Q86YT5 568 aaPredicted RBP16.13■□□□□ 0.17
CD28-203ENST00000458610 PHACTR4Q8IZ21 702 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 SLC25A45Q8N413 288 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 FSTL5Q8N475 847 aaPredicted RBP16.13■□□□□ 0.17
CD28-203ENST00000458610 PLA2G15Q8NCC3 412 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 OR56A4Q8NGH8 313 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 OR4C6Q8NH72 309 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 SCG3Q8WXD2 468 aaKnown RBP16.13■□□□□ 0.17
CD28-203ENST00000458610 CNDP2Q96KP4 475 aaKnown RBP16.13■□□□□ 0.17
CD28-203ENST00000458610 SPATA13Q96N96 652 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 FSD1LQ9BXM9 530 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 GPR63Q9BZJ6 419 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 GBA3Q9H227 469 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 TRABDQ9H4I3 376 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 NLGN3Q9NZ94 848 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 UBP1Q9NZI7 540 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 NCKIPSDQ9NZQ3 722 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 HACD3Q9P035 362 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 APOBEC3BQ9UH17 382 aaKnown RBP16.13■□□□□ 0.17
CD28-203ENST00000458610 CABIN1Q9Y6J0 2220 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 CFAP54Q96N23 3096 aa16.13■□□□□ 0.17
CD28-203ENST00000458610 DOCK9Q9BZ29 2069 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 C5orf60A6NFR6 353 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 ENC1O14682 589 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 AQP9O43315 295 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 ANXA6P08133 673 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 FTH1P19P0C7X4 201 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 MYCLP1P12525 358 aaPredicted RBP16.12■□□□□ 0.17
CD28-203ENST00000458610 HLA-DPA1P20036 260 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 DUSP3P51452 185 aaPredicted RBP16.12■□□□□ 0.17
CD28-203ENST00000458610 HK3P52790 923 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 RAET1GQ6H3X3 334 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 KDELC1Q6UW63 502 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 HID1Q8IV36 788 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 LMX1AQ8TE12 382 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 GLMNQ92990 594 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 FUBP1Q96AE4 644 aaKnown RBP16.12■□□□□ 0.17
CD28-203ENST00000458610 TEX101Q9BY14 249 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 ABCG8Q9H221 673 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 FAM83DQ9H4H8 585 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 USP29Q9HBJ7 922 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 DOLKQ9UPQ8 538 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 PCDHGA1Q9Y5H4 931 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 DGKBQ9Y6T7 804 aa16.12■□□□□ 0.17
CD28-203ENST00000458610 ANKRD36A6QL64 1941 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 PCNX2A6NKB5 2137 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 PSMD3O43242 534 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 CKMT2P17540 419 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 ACTN2P35609 894 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 SPINT3P49223 89 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 ILKQ13418 452 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 GSE1Q14687 1217 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 PTPRRQ15256 657 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 CDKN3Q16667 212 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 PARP6Q2NL67 630 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 TPRG1LQ5T0D9 272 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 ZDHHC20Q5W0Z9 365 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 LVRNQ6Q4G3 990 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 ADAMTSL4Q6UY14 1074 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 ARHGEF18Q6ZSZ5 1173 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 RD3Q7Z3Z2 195 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 ZNF548Q8NEK5 533 aaPredicted RBP16.11■□□□□ 0.17
CD28-203ENST00000458610 IPMKQ8NFU5 416 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 SLC35B2Q8TB61 432 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 FAM118BQ9BPY3 351 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 C10orf88Q9H8K7 445 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 UCKL1Q9NWZ5 548 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 JRKLQ9Y4A0 524 aa16.11■□□□□ 0.17
CD28-203ENST00000458610 CNOT1A5YKK6 2376 aaKnown RBP16.11■□□□□ 0.17
CD28-203ENST00000458610 FFAR2O15552 330 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 SIGLEC6O43699 453 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 GCATO75600 419 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 FGF1P05230 155 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 PMLP29590 882 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 RPIAP49247 311 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 DAB2P98082 770 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 CDK3Q00526 305 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 FOXC1Q12948 553 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 PEX6Q13608 980 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 ALG11Q2TAA5 492 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 P3H1Q32P28 736 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 PRRT3Q5FWE3 981 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 ZCCHC8Q6NZY4 707 aaKnown RBP16.1■□□□□ 0.17
CD28-203ENST00000458610 KDM7AQ6ZMT4 941 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 LYSMD3Q7Z3D4 306 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 TMC3Q7Z5M5 1100 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 HEATR4Q86WZ0 1026 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 GKN2Q86XP6 184 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 FAM71DQ8N9W8 422 aa16.1■□□□□ 0.17
CD28-203ENST00000458610 FAM181AQ8N9Y4 354 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms