RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 TPSAB1Q15661 275 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ZACNQ401N2 412 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ERFEQ4G0M1 354 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 LCN8Q6JVE9 175 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 FAM122CQ6P4D5 195 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 HACD2Q6Y1H2 254 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 SPATC1Q76KD6 591 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 GDPD3Q7L5L3 318 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ZNF438Q7Z4V0 828 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 HORMAD1Q86X24 394 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 MAP4K3Q8IVH8 894 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 METTL4Q8N3J2 472 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 PSD4Q8NDX1 1056 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 LILRB1Q8NHL6 650 aaPredicted RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 MCFD2Q8NI22 146 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 JOSD2Q8TAC2 188 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ISL2Q96A47 359 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 NXNL1Q96CM4 212 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ATXN7L3BQ96GX2 97 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ST6GAL2Q96JF0 529 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 ACAT2Q9BWD1 397 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 APOBEC3GQ9HC16 384 aaKnown RBP8.63□□□□□ -1.03
LSM5-208ENST00000450169 ITM2CQ9NQX7 267 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 NUP50Q9UKX7 468 aa8.63□□□□□ -1.03
LSM5-208ENST00000450169 PCM1Q15154 2024 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 TEX51A0A1B0GUA7 166 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 TMEM233B4DJY2 109 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 TCP10L2B9ZVM9 353 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 METTL18O95568 372 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 LDLRP01130 860 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 APOA1P02647 267 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 TNNI1P19237 187 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 PCMT1P22061 227 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 MIPP30301 263 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 CYP2C18P33260 490 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 CDH6P55285 790 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 GJA9P57773 515 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 NCS1P62166 190 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 POU6F2P78424 691 aaPredicted RBP8.62□□□□□ -1.03
LSM5-208ENST00000450169 PRPSAP1Q14558 356 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 PPP1R3AQ16821 1122 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 CYP51A1Q16850 503 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 COLEC12Q5KU26 742 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 OTUD3Q5T2D3 398 aaPredicted RBP8.62□□□□□ -1.03
LSM5-208ENST00000450169 TDRD10Q5VZ19 366 aaKnown RBP8.62□□□□□ -1.03
LSM5-208ENST00000450169 TAF2Q6P1X5 1199 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 STRADAQ7RTN6 431 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 PRSS48Q7RTY5 328 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 KCTD20Q7Z5Y7 419 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 CLEC14AQ86T13 490 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 P2RY8Q86VZ1 359 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 FBXO11Q86XK2 927 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 UBQLNLQ8IYU4 475 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 GPD1LQ8N335 351 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 PMEPA1Q969W9 287 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 LRCH3Q96II8 777 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 NODALQ96S42 347 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 MXRA8Q9BRK3 442 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 FAM213AQ9BRX8 229 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 ACE2Q9BYF1 805 aaPredicted RBP8.62□□□□□ -1.03
LSM5-208ENST00000450169 EPS8L2Q9H6S3 715 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 ACTR3BQ9P1U1 418 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 ARHGAP28Q9P2N2 729 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 ZNF639Q9UID6 485 aa8.62□□□□□ -1.03
LSM5-208ENST00000450169 BCLAF3A2AJT9 711 aaKnown RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 OR5K3A6NET4 321 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 AGAP5A6NIR3 686 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 A8MV72 311 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 TRIM77I1YAP6 450 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 TK2O00142 265 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 NME4O00746 187 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 SNX2O60749 519 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 MPOP05164 745 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 APOA4P06727 396 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 GFAPP14136 432 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 TAL1P17542 331 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 TBXAS1P24557 533 aaPredicted RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 GTF2E2P29084 291 aaKnown RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 FMO4P31512 558 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 RARRES1P49788 294 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 DEFA1P59665 94 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 DEFA3P59666 94 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ACTR2P61160 394 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 GABPAQ06546 454 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 RAD51Q06609 339 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ENPEPQ07075 957 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 SEMA5AQ13591 1074 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ACAP2Q15057 778 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 Q5BKY6 102 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 VARS2Q5ST30 1063 aaKnown RBP8.61□□□□□ -1.03
LSM5-208ENST00000450169 C6orf141Q5SZD1 244 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 GRTP1Q5TC63 336 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 SDE2Q6IQ49 451 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 SLC39A4Q6P5W5 647 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 TBPL2Q6SJ96 375 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 ZYG11AQ6WRX3 759 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 SH3BP5LQ7L8J4 393 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 NT5DC4Q86YG4 428 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 SLC22A15Q8IZD6 547 aa8.61□□□□□ -1.03
LSM5-208ENST00000450169 EMC1Q8N766 993 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms