RNA–Protein interactions for RNA: ENST00000448905.6

HMGB3-204, Transcript of high mobility group box 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGB3, Length 812 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-204ENST00000448905 PCK1P35558 622 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 ETV5P41161 510 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 ETV3P41162 512 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 NOP2P46087 812 aaKnown RBP13.27□□□□□ -0.29
HMGB3-204ENST00000448905 GPR1P46091 355 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 LIMK2P53671 638 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 CDH6P55285 790 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 MAZP56270 477 aaKnown RBP13.27□□□□□ -0.29
HMGB3-204ENST00000448905 CTBSQ01459 385 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 DPTQ07507 201 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 C16orf72Q14CZ0 275 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 STX1AQ16623 288 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 FILIP1LQ4L180 1135 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 ARMC12Q5T9G4 340 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 SLC30A9Q6PML9 568 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 ARHGAP36Q6ZRI8 547 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 Q6ZVL8 140 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 ZNF438Q7Z4V0 828 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 VASH2Q86V25 355 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 NRROSQ86YC3 692 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 IL22RA1Q8N6P7 574 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 OR4D9Q8NGE8 314 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 DTD2Q96FN9 168 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 FRMD8Q9BZ67 464 aaPredicted RBP13.27□□□□□ -0.29
HMGB3-204ENST00000448905 SLC25A18Q9H1K4 315 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 NOD2Q9HC29 1040 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 LMBRD1Q9NUN5 540 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 KCNK4Q9NYG8 393 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 TAS2R14Q9NYV8 317 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 FOXJ2Q9P0K8 574 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 CNOT8Q9UFF9 292 aaKnown RBP13.27□□□□□ -0.29
HMGB3-204ENST00000448905 SUFUQ9UMX1 484 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 PCDHGA3Q9Y5H0 932 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 ZNF462Q96JM2 2506 aa13.27□□□□□ -0.29
HMGB3-204ENST00000448905 FLNBO75369 2602 aaKnown RBP13.26□□□□□ -0.29
HMGB3-204ENST00000448905 IGHV5-10-1A0A0J9YXX1 117 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 GOLGA6L22H0YM25 854 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 SUV39H1O43463 412 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 GM2AP17900 193 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 CES1P23141 567 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 SERPINB6P35237 376 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 ADCY8P40145 1251 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 GPLD1P80108 840 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 CDK3Q00526 305 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 ITKQ08881 620 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 DPYSQ14117 519 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 NR1D2Q14995 579 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 CNGA3Q16281 694 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 ASIC2Q16515 512 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 DCAF12Q5T6F0 453 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 BORAQ6PGQ7 559 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 ZNF574Q6ZN55 896 aaPredicted RBP13.26□□□□□ -0.29
HMGB3-204ENST00000448905 CLEC17AQ6ZS10 378 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 TMPRSS9Q7Z410 1059 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 HSD11B1LQ7Z5J1 315 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 NLRP8Q86W28 1048 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 SFTPA2Q8IWL1 248 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 ARFGAP1Q8N6T3 406 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 NPWQ8N729 165 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 RCBTB1Q8NDN9 531 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 NUDT22Q9BRQ3 303 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 ZMYND15Q9H091 742 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 ADNPQ9H2P0 1102 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 HAUS4Q9H6D7 363 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 GEMIN8Q9NWZ8 242 aaKnown RBP13.26□□□□□ -0.29
HMGB3-204ENST00000448905 SLC39A1Q9NY26 324 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 SLC17A4Q9Y2C5 497 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 CFAP46Q8IYW2 2715 aa13.26□□□□□ -0.29
HMGB3-204ENST00000448905 TTC24A2A3L6 582 aaPredicted RBP13.25□□□□□ -0.29
HMGB3-204ENST00000448905 SMTNL1A8MU46 457 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 MAFKO60675 156 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 LRCH4O75427 683 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 FUCA1P04066 466 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 FGF3P11487 239 aaPredicted RBP13.25□□□□□ -0.29
HMGB3-204ENST00000448905 ITGB6P18564 788 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 AK4P27144 223 aaPredicted RBP13.25□□□□□ -0.29
HMGB3-204ENST00000448905 ACTR1BP42025 376 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 MMP13P45452 471 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 POLD2P49005 469 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 EPHB1P54762 984 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 RAB15P59190 212 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 ACTR1AP61163 376 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 KLHL30Q0D2K2 578 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 LRP8Q14114 963 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 PIGHQ14442 188 aaPredicted RBP13.25□□□□□ -0.29
HMGB3-204ENST00000448905 CCDC122Q5T0U0 273 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 TMEM71Q6P5X7 295 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 RBM43Q6ZSC3 357 aaKnown RBP13.25□□□□□ -0.29
HMGB3-204ENST00000448905 POLNQ7Z5Q5 900 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 ATPAF2Q8N5M1 289 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 OR10G6Q8NH81 332 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 EXD1Q8NHP7 514 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 JPH3Q8WXH2 748 aaPredicted RBP13.25□□□□□ -0.29
HMGB3-204ENST00000448905 HSPH1Q92598 858 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 NKD1Q969G9 470 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 SH3KBP1Q96B97 665 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 AP2M1Q96CW1 435 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 CCDC74BQ96LY2 380 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 GBP4Q96PP9 640 aa13.25□□□□□ -0.29
HMGB3-204ENST00000448905 PEBP4Q96S96 227 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms