RNA–Protein interactions for RNA: ENST00000448183.6

NEDD9-204, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best)

Gene NEDD9, Length 4,934 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-204ENST00000448183 LSM12Q3MHD2 195 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PTPN20Q4JDL3 420 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 HECTD3Q5T447 861 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CERCAMQ5T4B2 595 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RNF44Q7L0R7 432 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 AHI1Q8N157 1196 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 LRRC52Q8N7C0 313 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 EZH1Q92800 747 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PURBQ96QR8 312 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 TM6SF2Q9BZW4 377 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RMI1Q9H9A7 625 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CPA4Q9UI42 421 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF221Q9UK13 617 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 COQ6Q9Y2Z9 468 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 TMEM131LA2VDJ0 1609 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CCDC189A1A4V9 331 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 LRATO95237 230 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 AKR1A1P14550 325 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ADORA2AP29274 412 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RPL4P36578 427 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RPS9P46781 194 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 AKR1D1P51857 326 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 SEMA5AQ13591 1074 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ITGA7Q13683 1181 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PCBP1Q15365 356 aaKnown RBP eCLIP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 KCTD19Q17RG1 926 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 TYSND1Q2T9J0 566 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 KHDC1Q4VXA5 237 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ARSHQ5FYA8 562 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RNASEH2BQ5TBB1 312 aaKnown RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 IQSEC1Q6DN90 963 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 KLHL24Q6TFL4 600 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RAB43Q86YS6 212 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 ZNF655Q8N720 491 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 C1GALT1C1Q96EU7 318 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PPM1MQ96MI6 270 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 C1QTNF7Q9BXJ2 289 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 SLC39A8Q9C0K1 460 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 UNC93B1Q9H1C4 597 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 CXorf21Q9HAI6 301 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 GLOD4Q9HC38 313 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 AASDHPPTQ9NRN7 309 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 PTTG2Q9NZH5 202 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 RCOR3Q9P2K3 495 aaPredicted RBP7.78□□□□□ -1.16
NEDD9-204ENST00000448183 GMEB1Q9Y692 573 aa7.78□□□□□ -1.16
NEDD9-204ENST00000448183 YDJCA8MPS7 323 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 AGPSO00116 658 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 KHDRBS3O75525 346 aaKnown RBP7.77□□□□□ -1.16
NEDD9-204ENST00000448183 GPIP06744 558 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 CES1P23141 567 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 IGFBP5P24593 272 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 MTHFRP42898 656 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 OMPP47874 163 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 CCNHP51946 323 aaPredicted RBP7.77□□□□□ -1.16
NEDD9-204ENST00000448183 SIM2Q14190 667 aaPredicted RBP7.77□□□□□ -1.16
NEDD9-204ENST00000448183 CELF3Q5SZQ8 465 aaKnown RBP7.77□□□□□ -1.16
NEDD9-204ENST00000448183 ERICH5Q6P6B1 374 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 TDRPQ86YL5 185 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 RBFAQ8N0V3 343 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 COPS8Q99627 209 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 ADAM2Q99965 735 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 TPK1Q9H3S4 243 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 RNF19AQ9NV58 838 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 AKAP7Q9P0M2 348 aaPredicted RBP7.77□□□□□ -1.16
NEDD9-204ENST00000448183 DNMT3LQ9UJW3 386 aa7.77□□□□□ -1.16
NEDD9-204ENST00000448183 TNS2Q63HR2 1409 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 BCKDKO14874 412 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ANGPTL1O95841 491 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CCNE2O96020 404 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 MAGP20916 626 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 GNPDA1P46926 289 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 SEPHS1P49903 392 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 RHBDL3P58872 404 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PTP4A2Q12974 167 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 SLC25A52Q3SY17 297 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 TEX44Q53QW1 395 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 BRMS1LQ5PSV4 323 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 DACT2Q5SW24 774 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CNSTQ6PJW8 725 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 DEF8Q6ZN54 512 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 DET1Q7L5Y6 550 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 RASAL3Q86YV0 1011 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ZFPM1Q8IX07 1006 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 COLGALT2Q8IYK4 626 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CBR4Q8N4T8 237 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 LRRC57Q8N9N7 239 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 PIK3C3Q8NEB9 887 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 CENPNQ96H22 339 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 LENG8Q96PV6 779 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 RHBGQ9H310 441 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 MCUBQ9NWR8 336 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 NDOR1Q9UHB4 597 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 MKL2Q9ULH7 1088 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 ST3GAL5Q9UNP4 418 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 MFHAS1Q9Y4C4 1052 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 HES2Q9Y543 173 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 GPC6Q9Y625 555 aaPredicted RBP7.77□□□□□ -1.17
NEDD9-204ENST00000448183 TCRBV7S2A1N4TA0A589 114 aa7.77□□□□□ -1.17
NEDD9-204ENST00000448183 FAM92AA1XBS5 289 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms