RNA–Protein interactions for RNA: ENST00000447683.2

OTUB1-204, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 2

Gene OTUB1, Length 2,315 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-204ENST00000447683 INSIG1O15503 277 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 HSPA1AP0DMV8 641 aaKnown RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 HSPA1BP0DMV9 641 aaKnown RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 CD1DP15813 335 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 ZNF140P52738 457 aaPredicted RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 STC1P52823 247 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 PLK1P53350 603 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 INHBCP55103 352 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 PTERQ96BW5 349 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 PPP1R14BQ96C90 147 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 CCDC124Q96CT7 223 aaKnown RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 PHF21BQ96EK2 531 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 ZNF184Q99676 751 aaPredicted RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 AARSD1Q9BTE6 412 aaKnown RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 TRPC7Q9HCX4 862 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 CRTAMO95727 393 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 BAG2O95816 211 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 PRLP01236 227 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 CDC25CP30307 473 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 CORO1AP31146 461 aaKnown RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 SGSHP51688 502 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 ZNF678Q5SXM1 525 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 RNF111Q6ZNA4 994 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 EFCAB3Q8N7B9 438 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 PYDC1Q8WXC3 89 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 RCN3Q96D15 328 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 CLSTN3Q9BQT9 956 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 MRGBPQ9NV56 204 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 INTS10Q9NVR2 710 aaKnown RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 DNAAF2Q9NVR5 837 aaKnown RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 POLR3BQ9NW08 1133 aaPredicted RBP16.28■□□□□ 0.2
OTUB1-204ENST00000447683 STK39Q9UEW8 545 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 TBC1D30Q9Y2I9 924 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 SPO11Q9Y5K1 396 aa16.28■□□□□ 0.2
OTUB1-204ENST00000447683 A0A1B0GVM2 712 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 TCAF2A6NFQ2 919 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 ABLIM3O94929 683 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 SLC4A1P02730 911 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 RHOCP08134 193 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 ZNF37AP17032 561 aaPredicted RBP16.27■□□□□ 0.2
OTUB1-204ENST00000447683 CES1P23141 567 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 PRMT2P55345 433 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 CYTH1Q15438 398 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 TAF1AQ15573 450 aaPredicted RBP16.27■□□□□ 0.2
OTUB1-204ENST00000447683 TCHHL1Q5QJ38 904 aaPredicted RBP16.27■□□□□ 0.2
OTUB1-204ENST00000447683 IRGCQ6NXR0 463 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 RPS27LQ71UM5 84 aaKnown RBP16.27■□□□□ 0.2
OTUB1-204ENST00000447683 PGAM4Q8N0Y7 254 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 SLC26A7Q8TE54 656 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 IGSF21Q96ID5 467 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 MARK4Q96L34 752 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 SERPINI1Q99574 410 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 GPBP1L1Q9HC44 474 aaPredicted RBP16.27■□□□□ 0.2
OTUB1-204ENST00000447683 GKN1Q9NS71 199 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 TRPM5Q9NZQ8 1165 aa16.27■□□□□ 0.2
OTUB1-204ENST00000447683 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.27■□□□□ 0.19
OTUB1-204ENST00000447683 F11P03951 625 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 SCNN1BP51168 640 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 C1QTNF8P60827 252 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 ZNF177Q13360 481 aaPredicted RBP16.27■□□□□ 0.19
OTUB1-204ENST00000447683 UNC50Q53HI1 259 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 ADGRF1Q5T601 910 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 DHDDSQ86SQ9 333 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 KBTBD6Q86V97 674 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 ZNF461Q8TAF7 563 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 TRAPPC9Q96Q05 1148 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 KLF16Q9BXK1 252 aaPredicted RBP16.27■□□□□ 0.19
OTUB1-204ENST00000447683 TDRD1Q9BXT4 1180 aaKnown RBP16.27■□□□□ 0.19
OTUB1-204ENST00000447683 TMCO1Q9UM00 188 aa16.27■□□□□ 0.19
OTUB1-204ENST00000447683 UBFD1O14562 309 aaKnown RBP16.26■□□□□ 0.19
OTUB1-204ENST00000447683 HERVK_113P63132 956 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 PIGGQ5H8A4 983 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 RHEBL1Q8TAI7 183 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 TRMT2BQ96GJ1 504 aaKnown RBP16.26■□□□□ 0.19
OTUB1-204ENST00000447683 ERVK-6Q9BXR3 956 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 RNF38Q9H0F5 515 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 EFCAB1Q9HAE3 211 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 AGO1Q9UL18 857 aaKnown RBP16.26■□□□□ 0.19
OTUB1-204ENST00000447683 TRAF6Q9Y4K3 522 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 PLXNA4Q9HCM2 1894 aa16.26■□□□□ 0.19
OTUB1-204ENST00000447683 COL4A6Q14031 1691 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 PQBP1O60828 265 aaKnown RBP16.25■□□□□ 0.19
OTUB1-204ENST00000447683 CCL23P55773 120 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 DSG1Q02413 1049 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 KLC1Q07866 573 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 AFTPHQ6ULP2 937 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 BNC2Q6ZN30 1099 aaPredicted RBP16.25■□□□□ 0.19
OTUB1-204ENST00000447683 MDGA1Q8NFP4 955 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 WBP2Q969T9 261 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 TCF12Q99081 682 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 TFB2MQ9H5Q4 396 aaKnown RBP16.25■□□□□ 0.19
OTUB1-204ENST00000447683 SCUBE2Q9NQ36 999 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 WDR37Q9Y2I8 494 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 SUPT7LO94864 414 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 PARNO95453 639 aaKnown RBP16.25■□□□□ 0.19
OTUB1-204ENST00000447683 PMLP29590 882 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 ZNF423Q2M1K9 1284 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 TPGS2Q68CL5 300 aa16.25■□□□□ 0.19
OTUB1-204ENST00000447683 CXorf57Q6NSI4 855 aaKnown RBP16.25■□□□□ 0.19
OTUB1-204ENST00000447683 KIAA1841Q6NSI8 718 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms