RNA–Protein interactions for RNA: ENST00000447375.1

SSR4-205, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 427 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-205ENST00000447375 MAP3K6O95382 1288 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 TIMP2P16035 220 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 MMP13P45452 471 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 NR2C2P49116 596 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 PEX5P50542 639 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 SCNN1BP51168 640 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 SUOXP51687 545 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 PDX1P52945 283 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 AP1S1P61966 158 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 SPIDRQ14159 915 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 TFDP2Q14188 446 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 ZNF235Q14590 738 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 NR0B2Q15466 257 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 TFDP3Q5H9I0 405 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 TIGD7Q6NT04 549 aaPredicted RBP12.5□□□□□ -0.41
SSR4-205ENST00000447375 TTC7BQ86TV6 843 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 NT5DC3Q86UY8 548 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 VASH2Q86V25 355 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 RFX6Q8HWS3 928 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 CAMK1DQ8IU85 385 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 BBS5Q8N3I7 341 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 PGBD5Q8N414 524 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 OR13H1Q8NG92 308 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 WDR48Q8TAF3 677 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 HTR3CQ8WXA8 447 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 KLK6Q92876 244 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 HDAC11Q96DB2 347 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 NSMCE3Q96MG7 304 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 OLFM3Q96PB7 478 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 MGME1Q9BQP7 344 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 ATP13A3Q9H7F0 1226 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 AMACRQ9UHK6 382 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 ANAPC2Q9UJX6 822 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 HEY1Q9Y5J3 304 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 CREBBPQ92793 2442 aa12.5□□□□□ -0.41
SSR4-205ENST00000447375 LRRK2Q5S007 2527 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ANKRD36A6QL64 1941 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 A0A1W2PQU0 124 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 CCDC66A2RUB6 948 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 SPINT1O43278 529 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 TSPAN6O43657 245 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 PCDH8O95206 1070 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 PIGNO95427 931 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 CCNB1P14635 433 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 PRLRP16471 622 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 WT1P19544 449 aaPredicted RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 CTNNA2P26232 953 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 UGT1A5P35504 534 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ABL2P42684 1182 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 COPS2P61201 443 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 CCZ1BP86790 482 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 CCZ1P86791 482 aaPredicted RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 ADCY2Q08462 1091 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 PPIDQ08752 370 aaKnown RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 EIF3IQ13347 325 aaKnown RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 PDK1Q15118 436 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 PPP2R5EQ16537 467 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ZNF284Q2VY69 593 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 TMEM259Q4ZIN3 620 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 RALGPS1Q5JS13 557 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 PERM1Q5SV97 790 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 BRAT1Q6PJG6 821 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ZNF662Q6ZS27 426 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 HORMAD1Q86X24 394 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 SYCE1Q8N0S2 351 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 SLC22A18ASQ8N1D0 253 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 CCNYQ8ND76 341 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ZNF548Q8NEK5 533 aaPredicted RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 SPOCK2Q92563 424 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ECHDC3Q96DC8 303 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 RBM41Q96IZ5 413 aaKnown RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 FEM1CQ96JP0 617 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ZNF830Q96NB3 372 aaPredicted RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 NUDCD1Q96RS6 583 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 TSGA10Q9BZW7 698 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 BRD8Q9H0E9 1235 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 SYNDIG1Q9H7V2 258 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 NOD2Q9HC29 1040 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 FZD3Q9NPG1 666 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 ZFR2Q9UPR6 939 aaKnown RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 EFR3BQ9Y2G0 817 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 CSNK1G3Q9Y6M4 447 aa12.49□□□□□ -0.41
SSR4-205ENST00000447375 UTP20O75691 2785 aaKnown RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 USP9YO00507 2555 aaPredicted RBP12.49□□□□□ -0.41
SSR4-205ENST00000447375 hCG_1818297A0A087WSY0 165 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 TRAFD1O14545 582 aaPredicted RBP12.48□□□□□ -0.41
SSR4-205ENST00000447375 KRT86O43790 486 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 CST8O60676 142 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 CES1P23141 567 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 SERPINA4P29622 427 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 AKT2P31751 481 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 RIPPLY3P57055 190 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 RWDD2BP57060 319 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 CLDN2P57739 230 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 RPS21P63220 83 aaKnown RBP12.48□□□□□ -0.41
SSR4-205ENST00000447375 BCL2L1Q07817 233 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 KCNAB2Q13303 367 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 UGP2Q16851 508 aa12.48□□□□□ -0.41
SSR4-205ENST00000447375 DEFB133Q30KQ1 61 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms