RNA–Protein interactions for RNA: ENST00000444408.1

AP1S3-207, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4

Gene AP1S3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-207ENST00000444408 ETNK1Q9HBU6 452 aa17.14■□□□□ 0.33
AP1S3-207ENST00000444408 TMEM9BQ9NQ34 198 aa17.14■□□□□ 0.33
AP1S3-207ENST00000444408 PNMA8BQ9ULN7 279 aaPredicted RBP17.14■□□□□ 0.33
AP1S3-207ENST00000444408 CNOT1A5YKK6 2376 aaKnown RBP17.14■□□□□ 0.33
AP1S3-207ENST00000444408 PDE2AO00408 941 aaPredicted RBP17.13■□□□□ 0.33
AP1S3-207ENST00000444408 CES2O00748 559 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 BUD23O43709 281 aaKnown RBP17.13■□□□□ 0.33
AP1S3-207ENST00000444408 EPOP01588 193 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 ETF1P62495 437 aaKnown RBP17.13■□□□□ 0.33
AP1S3-207ENST00000444408 TRIP13Q15645 432 aaPredicted RBP17.13■□□□□ 0.33
AP1S3-207ENST00000444408 KCTD16Q68DU8 428 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 CCDC70Q6NSX1 233 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 CREG2Q8IUH2 290 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 PDCD7Q8N8D1 485 aaKnown RBP17.13■□□□□ 0.33
AP1S3-207ENST00000444408 C1QTNF7Q9BXJ2 289 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 MAGEE1Q9HCI5 957 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 GPR27Q9NS67 375 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 PIH1D1Q9NWS0 290 aaKnown RBP17.13■□□□□ 0.33
AP1S3-207ENST00000444408 AAR2Q9Y312 384 aaKnown RBP17.13■□□□□ 0.33
AP1S3-207ENST00000444408 SAR1BQ9Y6B6 198 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 CHD6Q8TD26 2715 aa17.13■□□□□ 0.33
AP1S3-207ENST00000444408 USP24Q9UPU5 2620 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 PSMD11O00231 422 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 SLC30A4O14863 429 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 FOXD2O60548 495 aaPredicted RBP17.12■□□□□ 0.33
AP1S3-207ENST00000444408 ZNF189O75820 626 aaPredicted RBP17.12■□□□□ 0.33
AP1S3-207ENST00000444408 ZNF30P17039 623 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 NFKBIAP25963 317 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 COILP38432 576 aaPredicted RBP17.12■□□□□ 0.33
AP1S3-207ENST00000444408 TERF1P54274 439 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 OVGP1Q12889 678 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 PDE1CQ14123 709 aaPredicted RBP17.12■□□□□ 0.33
AP1S3-207ENST00000444408 FZD2Q14332 565 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 PTPRCAPQ14761 206 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 CYP1B1Q16678 543 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 ZNF423Q2M1K9 1284 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 MICALCLQ6ZW33 695 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 GSTA5Q7RTV2 222 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 TTC30BQ8N4P2 665 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 CCDC89Q8N998 374 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 BLOC1S5Q8TDH9 187 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 TBL1YQ9BQ87 522 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 APOOQ9BUR5 198 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 RIOK2Q9BVS4 552 aaKnown RBP17.12■□□□□ 0.33
AP1S3-207ENST00000444408 LGR4Q9BXB1 951 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 GPR63Q9BZJ6 419 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 ZDHHC5Q9C0B5 715 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 ZFYVE1Q9HBF4 777 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 BPIFA1Q9NP55 256 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 GDF3Q9NR23 364 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 RAB6BQ9NRW1 208 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 TMEM131Q92545 1883 aa17.12■□□□□ 0.33
AP1S3-207ENST00000444408 GOLGA6CA6NDK9 693 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 GOLGA6BA6NDN3 693 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 PHF2O75151 1096 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 SOD1P00441 154 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 FGF1P05230 155 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 GOLGA6DP0CG33 693 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 TPH1P17752 444 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 HLA-DPA1P20036 260 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 CASQ1P31415 396 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 GRIA1P42261 906 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 RABIFP47224 123 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 VPS41P49754 854 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 BNIP3Q12983 259 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 MSLNQ13421 630 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-207ENST00000444408 ESRP1Q6NXG1 681 aaKnown RBP17.11■□□□□ 0.33
AP1S3-207ENST00000444408 PNCKQ6P2M8 343 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 TMC3Q7Z5M5 1100 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 SKA1Q96BD8 255 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 C16orf45Q96MC5 204 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-207ENST00000444408 NAP1L3Q99457 506 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-207ENST00000444408 ELF4Q99607 663 aaPredicted RBP17.11■□□□□ 0.33
AP1S3-207ENST00000444408 HOMER3Q9NSC5 361 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 DNAAF2Q9NVR5 837 aaKnown RBP17.11■□□□□ 0.33
AP1S3-207ENST00000444408 GOLGA6AQ9NYA3 693 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 KLF15Q9UIH9 416 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 KCTD3Q9Y597 815 aa17.11■□□□□ 0.33
AP1S3-207ENST00000444408 SPTY2D1-AS1A0A0U1RR47 76 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 A0A1B0GTQ1 180 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 SCAMP1O15126 338 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 SDC3O75056 442 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 AP2A1O95782 977 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 CER1O95813 267 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 CD59P13987 128 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 SPINT3P49223 89 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 EIF2B5Q13144 721 aaKnown RBP17.1■□□□□ 0.33
AP1S3-207ENST00000444408 MTM1Q13496 603 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 ST3GAL2Q16842 350 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 PPM1JQ5JR12 505 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 ALS2CLQ60I27 953 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 CCDC137Q6PK04 289 aaKnown RBP17.1■□□□□ 0.33
AP1S3-207ENST00000444408 IL27RAQ6UWB1 636 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 GATAD2AQ86YP4 633 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 GPR26Q8NDV2 337 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 ATL2Q8NHH9 583 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 AP2M1Q96CW1 435 aa17.1■□□□□ 0.33
AP1S3-207ENST00000444408 DDX47Q9H0S4 455 aaKnown RBP17.1■□□□□ 0.33
AP1S3-207ENST00000444408 TCEAL2Q9H3H9 227 aaPredicted RBP17.1■□□□□ 0.33
AP1S3-207ENST00000444408 TM7SF3Q9NS93 570 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms