RNA–Protein interactions for RNA: ENST00000443908.5

SF1-210, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-210ENST00000443908 GAB3Q8WWW8 586 aa13.46□□□□□ -0.25
SF1-210ENST00000443908 MFSD3Q96ES6 412 aa13.46□□□□□ -0.25
SF1-210ENST00000443908 CERS2Q96G23 380 aa13.46□□□□□ -0.25
SF1-210ENST00000443908 FCRL3Q96P31 734 aaPredicted RBP13.46□□□□□ -0.25
SF1-210ENST00000443908 RUFY1Q96T51 708 aa13.46□□□□□ -0.25
SF1-210ENST00000443908 RSPH9Q9H1X1 276 aaPredicted RBP13.46□□□□□ -0.25
SF1-210ENST00000443908 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
SF1-210ENST00000443908 ANKRD36A6QL64 1941 aa13.46□□□□□ -0.25
SF1-210ENST00000443908 CKAP5Q14008 2032 aa13.46□□□□□ -0.26
SF1-210ENST00000443908 RALGAPA1Q6GYQ0 2036 aa13.46□□□□□ -0.26
SF1-210ENST00000443908 ANTXRLA6NF34 631 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 SLC7A4O43246 635 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 SYNCRIPO60506 623 aaKnown RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 ADH1BP00325 375 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 SHBGP04278 402 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 PRKCGP05129 697 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 ZNF806P0C7X5 589 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 CYP2A6P11509 494 aaPredicted RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 ZNF30P17039 623 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 LPOP22079 712 aaPredicted RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 SLC8A1P32418 973 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 HMGCLP35914 325 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 SEC13P55735 322 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 MGAT5Q09328 741 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 IFFO1Q0D2I5 559 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 CDKN3Q16667 212 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 UGP2Q16851 508 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 LONRF1Q17RB8 773 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 SKIDA1Q1XH10 827 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 EOGTQ5NDL2 527 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 N4BP2L1Q5TBK1 243 aaPredicted RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 CAPN12Q6ZSI9 719 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 MARK2Q7KZI7 788 aaKnown RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 PARS2Q7L3T8 475 aaKnown RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 LMNTD2Q8IXW0 634 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 RAVER1Q8IY67 606 aaKnown RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 MDGA1Q8NFP4 955 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 OR13J1Q8NGT2 312 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 OR2T3Q8NH03 318 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 CDKL2Q92772 493 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 LOXL4Q96JB6 756 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 ZNF778Q96MU6 729 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 TRIM56Q9BRZ2 755 aaKnown RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 CD248Q9HCU0 757 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 NLE1Q9NVX2 485 aaPredicted RBP13.45□□□□□ -0.26
SF1-210ENST00000443908 SLC24A2Q9UI40 661 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 MYLKQ15746 1914 aa13.45□□□□□ -0.26
SF1-210ENST00000443908 EXOC1LA0A1B0GW35 172 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 C16orf96A6NNT2 1141 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 H7C0S8 307 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 AGPSO00116 658 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 KPNA3O00505 521 aaPredicted RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 RNASEH1O60930 286 aaKnown RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 ADAM23O75077 832 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 RNF40O75150 1001 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 KLF8O95600 359 aaPredicted RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 ALPIP09923 528 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 PIRTP0C851 137 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 HOXB2P14652 356 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 TIMP2P16035 220 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 CTPS1P17812 591 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 VIPR1P32241 457 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 HNF1BP35680 557 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 HADHAP40939 763 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 ARCN1P48444 511 aaKnown RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 KBTBD12Q3ZCT8 623 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 C2orf27AQ580R0 203 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 STPG1Q5TH74 334 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 ZNF776Q68DI1 518 aaPredicted RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 ESRP1Q6NXG1 681 aaKnown RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 TRMT10BQ6PF06 316 aaKnown RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 DPPA4Q7L190 304 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 LYSMD3Q7Z3D4 306 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 CNTN4Q8IWV2 1026 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 TXNDC5Q8NBS9 432 aaKnown RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 OR2W6PQ8NHA6 318 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 GABPB2Q8TAK5 448 aaPredicted RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 UHMK1Q8TAS1 419 aaKnown RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 SCG3Q8WXD2 468 aaKnown RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 RAB7BQ96AH8 199 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 ARRDC3Q96B67 414 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 SGSM3Q96HU1 749 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 SH3GL2Q99962 352 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 DHRS4Q9BTZ2 278 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 HDAC8Q9BY41 377 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 SMOC1Q9H4F8 434 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 ZFYVE1Q9HBF4 777 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 DYRK4Q9NR20 520 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 POLR3BQ9NW08 1133 aaPredicted RBP13.44□□□□□ -0.26
SF1-210ENST00000443908 IL17CQ9P0M4 197 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 VPS18Q9P253 973 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 ANGPTL2Q9UKU9 493 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 SARDHQ9UL12 918 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 MMP17Q9ULZ9 603 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 SCML1Q9UN30 329 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 ARL5AQ9Y689 179 aa13.44□□□□□ -0.26
SF1-210ENST00000443908 C1orf232A0A0U1RR37 186 aa13.43□□□□□ -0.26
SF1-210ENST00000443908 A0A1W2PQF6 199 aa13.43□□□□□ -0.26
SF1-210ENST00000443908 NPIPB15A6NHN6 443 aaPredicted RBP13.43□□□□□ -0.26
SF1-210ENST00000443908 RASGRF2O14827 1237 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms