RNA–Protein interactions for RNA: ENST00000437003.3

TMEM116-202, Transcript of transmembrane protein 116, humanhuman

Gene TMEM116, Length 2,761 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-202ENST00000437003 TOR1BO14657 336 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 TREHO43280 583 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 CLPXO76031 633 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 YBX3P16989 372 aaKnown RBP eCLIP12.39□□□□□ -0.43
TMEM116-202ENST00000437003 IL10P22301 178 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 CD68P34810 354 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-202ENST00000437003 ADRA1BP35368 520 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 HK2P52789 917 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 KCNC4Q03721 635 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 CTBP1Q13363 440 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 SQLEQ14534 574 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 PAFAH1B3Q15102 231 aaKnown RBP12.39□□□□□ -0.43
TMEM116-202ENST00000437003 MAPRE2Q15555 327 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 GPRIN1Q7Z2K8 1008 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 ZC3HC1Q86WB0 502 aaKnown RBP12.39□□□□□ -0.43
TMEM116-202ENST00000437003 CEP97Q8IW35 865 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 DDIASQ8IXT1 998 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 ARRDC4Q8NCT1 418 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 RDH11Q8TC12 318 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 SGCDQ92629 289 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 NT5C3BQ969T7 300 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 MAELQ96JY0 434 aaKnown RBP12.39□□□□□ -0.43
TMEM116-202ENST00000437003 C1orf50Q9BV19 199 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 MLPHQ9BV36 600 aaPredicted RBP12.39□□□□□ -0.43
TMEM116-202ENST00000437003 NANOGQ9H9S0 305 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 ARMC1Q9NVT9 282 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 CPQQ9Y646 472 aa12.39□□□□□ -0.43
TMEM116-202ENST00000437003 NR5A2O00482 541 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 KPNA4O00629 521 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 NME4O00746 187 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 JCHAINP01591 159 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 CHRM3P20309 590 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PSMA4P25789 261 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 EEF1DP29692 281 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 RPS3AP61247 264 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 MPP1Q00013 466 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 DNASE1L3Q13609 305 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 SLC12A1Q13621 1099 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 MFSD10Q14728 455 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 BCL2A1Q16548 175 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 UBXN11Q5T124 520 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 INTS11Q5TA45 600 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 TWF2Q6IBS0 349 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PAQR9Q6ZVX9 377 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 LIMS2Q7Z4I7 341 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PLEKHH3Q7Z736 793 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 RETREG3Q86VR2 466 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 DENND6AQ8IWF6 608 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 CADM3Q8N126 398 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 TOP6BLQ8N6T0 577 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 BRI3BPQ8WY22 251 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 STARD8Q92502 1023 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 SNX19Q92543 992 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 HDAC10Q969S8 669 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 SLC45A3Q96JT2 553 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 C9orf16Q9BUW7 83 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 TRPV5Q9NQA5 729 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 AGPAT4Q9NRZ5 378 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PKD2L2Q9NZM6 624 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 WARS2Q9UGM6 360 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 GIT1Q9Y2X7 761 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 ACOT9Q9Y305 439 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PGK1P00558 417 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 WARSP23381 471 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 RAD23AP54725 363 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 GJA9P57773 515 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PGS1Q32NB8 556 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 XKR4Q5GH76 650 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 OTUD3Q5T2D3 398 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 KIAA0319Q5VV43 1072 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 CLEC6AQ6EIG7 209 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 ZCCHC8Q6NZY4 707 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 OTOP3Q7RTS5 596 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 TERB1Q8NA31 727 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PCYOX1LQ8NBM8 494 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 GABPB2Q8TAK5 448 aaPredicted RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 DUS3LQ96G46 650 aaKnown RBP12.38□□□□□ -0.43
TMEM116-202ENST00000437003 CSF3RQ99062 836 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 GPR22Q99680 433 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 SLC25A23Q9BV35 468 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 RHOBTB2Q9BYZ6 727 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 PALMDQ9NP74 551 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 SARDHQ9UL12 918 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 TMCC3Q9ULS5 477 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 SLC30A1Q9Y6M5 507 aa12.38□□□□□ -0.43
TMEM116-202ENST00000437003 TRIP12Q14669 1992 aaPredicted RBP12.37□□□□□ -0.43
TMEM116-202ENST00000437003 TRIM64A6NGJ6 449 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 TARM1B6A8C7 271 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 INPP4BO15327 924 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 FYNP06241 537 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 PABPC1P11940 636 aaKnown RBP12.37□□□□□ -0.43
TMEM116-202ENST00000437003 CAPGP40121 348 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 CLK1P49759 484 aaKnown RBP12.37□□□□□ -0.43
TMEM116-202ENST00000437003 INPP5AQ14642 412 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 POU6F1Q14863 301 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 KIF19Q2TAC6 998 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 CYBRD1Q53TN4 286 aa12.37□□□□□ -0.43
TMEM116-202ENST00000437003 SMG8Q8ND04 991 aaKnown RBP12.37□□□□□ -0.43
TMEM116-202ENST00000437003 OR13F1Q8NGS4 319 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms