RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 VWA7Q9Y334 891 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 OTOL1A6NHN0 477 aaPredicted RBP21.1■□□□□ 0.97
PTPRF-207ENST00000436724 ITM2AO43736 263 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 LYPLA1O75608 230 aaPredicted RBP21.1■□□□□ 0.97
PTPRF-207ENST00000436724 MC4RP32245 332 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 MAPK8P45983 427 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 OCRLQ01968 901 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 STX3Q13277 289 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 PEX6Q13608 980 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 RAB30Q15771 203 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 PSAPL1Q6NUJ1 521 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 AFTPHQ6ULP2 937 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 FSTL5Q8N475 847 aaPredicted RBP21.1■□□□□ 0.97
PTPRF-207ENST00000436724 CHST14Q8NCH0 376 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 C10orf82Q8WW14 230 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 GPR78Q96P69 363 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 ZDHHC6Q9H6R6 413 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 MAGEE1Q9HCI5 957 aa21.1■□□□□ 0.97
PTPRF-207ENST00000436724 A0A0J9YYE9 177 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 PALM2-AKAP2B1ALY0 433 aaPredicted RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 SOCS5O75159 536 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 SNNO75324 88 aaPredicted RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 PAPLNO95428 1278 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 TRBC1P01850 177 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ADH5P11766 374 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 PSMA3P25788 255 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 SERPINA4P29622 427 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 HNF1BP35680 557 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ITGA9Q13797 1035 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 SDCCAG8Q86SQ7 713 aaPredicted RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 SMARCD2Q92925 531 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ISG20Q96AZ6 181 aaKnown RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 MOCOSQ96EN8 888 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 SCYL1Q96KG9 808 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 HACD3Q9P035 362 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 IL17CQ9P0M4 197 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 POLR2EP19388 210 aaKnown RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 OGNP20774 298 aaKnown RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ARRB2P32121 409 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 RIPK1Q13546 671 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 CSHL1Q14406 222 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 TYSND1Q2T9J0 566 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 WLSQ5T9L3 541 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 TMEM207Q6UWW9 146 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ASRGL1Q7L266 308 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 KIAA0907Q7Z7F0 614 aaPredicted RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 AHI1Q8N157 1196 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 BPIFB1Q8TDL5 484 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 HEXDCQ8WVB3 486 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ANKRD49Q8WVL7 239 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 TSNARE1Q96NA8 513 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 CIPCQ9C0C6 399 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 GPAMQ9HCL2 828 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ACSS2Q9NR19 701 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ARHGEF3Q9NR81 526 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 MARCOQ9UEW3 520 aaPredicted RBP21.09■□□□□ 0.97
PTPRF-207ENST00000436724 ERVW-1Q9UQF0 538 aa21.09■□□□□ 0.97
PTPRF-207ENST00000436724 C1orf232A0A0U1RR37 186 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 UBA6A0AVT1 1052 aaPredicted RBP21.08■□□□□ 0.97
PTPRF-207ENST00000436724 KLHL2O95198 593 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 CLDN7O95471 211 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 TROVE2P10155 538 aaKnown RBP eCLIP21.08■□□□□ 0.97
PTPRF-207ENST00000436724 KITP10721 976 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 HMGCLP35914 325 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 SULT2A1Q06520 285 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 CCDC15Q0P6D6 951 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 CARD16Q5EG05 197 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 RAB3IL1Q8TBN0 382 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 MRPL38Q96DV4 380 aaKnown RBP21.08■□□□□ 0.97
PTPRF-207ENST00000436724 TRIM55Q9BYV6 548 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 MTG2Q9H4K7 406 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 XPR1Q9UBH6 696 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 BAIAP2L1Q9UHR4 511 aa21.08■□□□□ 0.97
PTPRF-207ENST00000436724 A0A0G2JND7 137 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 CXorf51AA0A1B0GTR3 108 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 UGT2B4P06133 528 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 RALBP11234 206 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 DGKGP49619 791 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 TIAL1Q01085 375 aaKnown RBP eCLIP21.07■□□□□ 0.96
PTPRF-207ENST00000436724 HYAL1Q12794 435 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 PREPLQ4J6C6 727 aaPredicted RBP21.07■□□□□ 0.96
PTPRF-207ENST00000436724 ZRANB3Q5FWF4 1079 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 LRRC73Q5JTD7 316 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 LRRC8EQ6NSJ5 796 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 NAPRTQ6XQN6 538 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 GPR149Q86SP6 731 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 KIF2BQ8N4N8 673 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 PCDH20Q8N6Y1 951 aaKnown RBP21.07■□□□□ 0.96
PTPRF-207ENST00000436724 ZNF557Q8N988 423 aaPredicted RBP21.07■□□□□ 0.96
PTPRF-207ENST00000436724 KLHL29Q96CT2 875 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 MRGPRX3Q96LB0 322 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 C7orf26Q96N11 449 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 IGSF5Q9NSI5 407 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 FBXO10Q9UK96 956 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 TRIM33Q9UPN9 1127 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 PKP3Q9Y446 797 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 HEPACAM2A8MVW5 462 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 TTC34A8MYJ7 566 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 IL1BP01584 269 aa21.07■□□□□ 0.96
PTPRF-207ENST00000436724 CCDC166P0CW27 439 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms