RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SWAP70Q9UH65 585 aa2.19□□□□□ -2.06
CDC40-204ENST00000431461 TTC7AQ9ULT0 858 aaPredicted RBP2.19□□□□□ -2.06
CDC40-204ENST00000431461 NFE2L3Q9Y4A8 694 aa2.19□□□□□ -2.06
CDC40-204ENST00000431461 NOTCH2Q04721 2471 aa2.19□□□□□ -2.06
CDC40-204ENST00000431461 LOC100509620A0A075B734 347 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 CLEC18AA5D8T8 446 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SYNDIG1LA6NDD5 238 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 CDRT15L2A8MXV6 281 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 NPIPB11E5RHQ5 1161 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 K7ENM7 598 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 RGS14O43566 566 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 LDB2O43679 373 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 BUD23O43709 281 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 KCNJ13O60928 360 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 JRKO75564 520 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 CH25HO95992 272 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 LCATP04180 440 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 HIST1H2ABP04908 130 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 HIST1H2ADP20671 130 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 MAOAP21397 527 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 UBA1P22314 1058 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 PPARGP37231 505 aaPredicted RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 CLCN5P51795 746 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 TERF1P54274 439 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 DSCR9P59020 149 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SEC61BP60468 96 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 MRPS34P82930 218 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 POU3F1Q03052 451 aaPredicted RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 CRYZQ08257 329 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 DDR1Q08345 913 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 GRIK2Q13002 908 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 CAPSQ13938 189 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 KRT32Q14532 448 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SF3B4Q15427 424 aaKnown RBP eCLIP2.18□□□□□ -2.06
CDC40-204ENST00000431461 NAB2Q15742 525 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 TBCEQ15813 527 aaPredicted RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 CALCRLQ16602 461 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SOWAHAQ2M3V2 549 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 C15orf59Q2T9L4 293 aaPredicted RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 PRAMEF19Q5SWL8 479 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 WDR78Q5VTH9 848 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 NUGGCQ68CJ6 796 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SIGIRRQ6IA17 410 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 FAM180BQ6P0A1 224 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 KCTD18Q6PI47 426 aaPredicted RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 TSSK4Q6SA08 328 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 CCDC129Q6ZRS4 1044 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 HIST3H2AQ7L7L0 130 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 ZNF367Q7RTV3 350 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 PXKQ7Z7A4 578 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 GPSM1Q86YR5 675 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 CLEC18CQ8NCF0 446 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 HUS1BQ8NHY5 278 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SNRNP27Q8WVK2 155 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 TXNDC15Q96J42 360 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 FEM1CQ96JP0 617 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 ZNF385AQ96PM9 386 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 DUX5Q96PT3 197 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 NUDCD1Q96RS6 583 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 MPHOSPH8Q99549 860 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SLC25A33Q9BSK2 321 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 MSTO1Q9BUK6 570 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 MRPL1Q9BYD6 325 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 TMEM39BQ9GZU3 492 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SMARCAD1Q9H4L7 1026 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 FKRPQ9H9S5 495 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 PLEKHA5Q9HAU0 1116 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 PCDH9Q9HC56 1237 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 LTB4R2Q9NPC1 389 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 SLC6A13Q9NSD5 602 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 MCM9Q9NXL9 1143 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 CISD1Q9NZ45 108 aaKnown RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 PLEKHB1Q9UF11 243 aaPredicted RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 SLCO3A1Q9UIG8 710 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 FBXO9Q9UK97 447 aaPredicted RBP2.18□□□□□ -2.06
CDC40-204ENST00000431461 FBXW11Q9UKB1 542 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 NAALADL1Q9UQQ1 740 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 TMEM5Q9Y2B1 443 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 STON1Q9Y6Q2 735 aa2.18□□□□□ -2.06
CDC40-204ENST00000431461 WDR81Q562E7 1941 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ERI2A8K979 691 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 USO1O60763 962 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 TMCC2O75069 709 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 RGS11O94810 467 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ACAA1P09110 424 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 SRCP12931 536 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 ATP1A3P13637 1013 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 CD72P21854 359 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 TCEA1P23193 301 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 HNRNPH1P31943 449 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 USP8P40818 1118 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PIK3CAP42336 1068 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 PIP4K2AP48426 406 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 LMAN1P49257 510 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 CLCNKAP51800 687 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 TMPRSS3P57727 454 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 CLDN2P57739 230 aa2.17□□□□□ -2.06
CDC40-204ENST00000431461 EEF1A1P68104 462 aaKnown RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 CSNK2A1P68400 391 aaPredicted RBP2.17□□□□□ -2.06
CDC40-204ENST00000431461 CALD1Q05682 793 aaKnown RBP2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms