RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PXNP49023 591 aaPredicted RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 RPL34P49207 117 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 GP2P55259 537 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 OCA2Q04671 838 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PTPN11Q06124 597 aaPredicted RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 SURF1Q15526 300 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 UGP2Q16851 508 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PLEKHG6Q3KR16 790 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SETD6Q8TBK2 473 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 HPS1Q92902 700 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 LRRC58Q96CX6 371 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 VPS39Q96JC1 886 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 MRPL57Q9BQC6 102 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 TRIT1Q9H3H1 467 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 EPS8L2Q9H6S3 715 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CASS4Q9NQ75 786 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ERVW-1Q9UQF0 538 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 H7C0C1 242 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 GARSP41250 739 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 PTGER2P43116 358 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ATP5OP48047 213 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ZNF181Q2M3W8 571 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 FKBP1CQ5VVH2 108 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 KDM4DQ6B0I6 523 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 BLOC1S3Q6QNY0 202 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 OFCC1Q8IZS5 231 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 IL17RDQ8NFM7 739 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 IL31RAQ8NI17 732 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ACSF2Q96CM8 615 aaPredicted RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 MARCH7Q9H992 704 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SERPINA10Q9UK55 444 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CNOT6Q9ULM6 557 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 CHD9Q3L8U1 2897 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 DDTLA6NHG4 134 aaPredicted RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 MED7O43513 233 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 KATNA1O75449 491 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 GABBR2O75899 941 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 HPRP00739 348 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 GFAPP14136 432 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 MFSD10Q14728 455 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 NEDD8Q15843 81 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 AGKQ53H12 422 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SLC26A9Q7LBE3 791 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SLC51BQ86UW2 128 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SGCDQ92629 289 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.14□□□□□ -1.597e-11■■■■□ 26.1
RIF1-203ENST00000428287 RAVER2Q9HCJ3 691 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 INTS10Q9NVR2 710 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 SMPD4Q9NXE4 827 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PDE10AQ9Y233 779 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 TCRBV5S2A0A599 114 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 OR5K3A6NET4 321 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ACKR2O00590 384 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 OGTO15294 1046 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PRKD3O94806 890 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 STAU1O95793 577 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 MYCP01106 439 aaPredicted RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 LDLRP01130 860 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ALBP02768 609 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 HOXC6P09630 235 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 NELFEP18615 380 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 PGAM1P18669 254 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 FGFR3P22607 806 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 MAGEA11P43364 429 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PRIM2P49643 509 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SQLEQ14534 574 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 TAF5Q15542 800 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 BRMS1LQ5PSV4 323 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 VARS2Q5ST30 1063 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 STEAP3Q658P3 488 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 FAM160B2Q86V87 743 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 FAM20CQ8IXL6 584 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 DPP10Q8N608 796 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 C7orf31Q8N865 590 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CDK5RAP1Q96SZ6 601 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 RHOBTB2Q9BYZ6 727 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SACM1LQ9NTJ5 587 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 NDUFAF1Q9Y375 327 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 C16orf96A6NNT2 1141 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 SYCE1LA8MT33 242 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CA12O43570 354 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 KRT75O95678 551 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CHRNA1P02708 482 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ICAM1P05362 532 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 ALDOCP09972 364 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 CDH1P12830 882 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 JUNDP17535 347 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 RYKP34925 604 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 UGT2B10P36537 528 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 MTMR1Q13613 665 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 FASTKQ14296 549 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 PSMD5Q16401 504 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 PLA2G4EQ3MJ16 856 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 RNF169Q8NCN4 708 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 HTR3CQ8WXA8 447 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 RPL3LQ92901 407 aaKnown RBP5.14□□□□□ -1.59
RIF1-203ENST00000428287 ST6GAL2Q96JF0 529 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 FAM198AQ9UFP1 575 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 CDYLQ9Y232 598 aa5.14□□□□□ -1.59
RIF1-203ENST00000428287 KIAA1549Q9HCM3 1950 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms