RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 AMFRQ9UKV5 643 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 ITM2BQ9Y287 266 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 SLC17A4Q9Y2C5 497 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 ZKSCAN5Q9Y2L8 839 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 HEY1Q9Y5J3 304 aa9.14□□□□□ -0.95
SMC1A-203ENST00000428014 GRID2IPA4D2P6 1211 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 KLHL33A6NCF5 533 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 NPIPB15A6NHN6 443 aaPredicted RBP9.13□□□□□ -0.95
SMC1A-203ENST00000428014 TCEA3O75764 348 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 ANXA9O76027 345 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 NDST3O95803 873 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 JCHAINP01591 159 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 JUNDP17535 347 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 HLA-DPA1P20036 260 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 LHCGRP22888 699 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 PTPN3P26045 913 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 STIP1P31948 543 aaKnown RBP9.13□□□□□ -0.95
SMC1A-203ENST00000428014 HNF1BP35680 557 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 HMGCLP35914 325 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 GJC1P36383 396 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 EPHB1P54762 984 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CLDN2P57739 230 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 PTSQ03393 145 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CDK18Q07002 472 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 NIPAL4Q0D2K0 466 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 ZBTB17Q13105 803 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 KLF1Q13351 362 aaPredicted RBP9.13□□□□□ -0.95
SMC1A-203ENST00000428014 INPP5AQ14642 412 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CDKN3Q16667 212 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 ITPRIPL1Q6GPH6 555 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CCDC70Q6NSX1 233 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 OGFOD3Q6PK18 319 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CRTC1Q6UUV9 634 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 LAYNQ6UX15 382 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 PEX26Q7Z412 305 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 GKN2Q86XP6 184 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CPNE8Q86YQ8 564 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 PHACTR4Q8IZ21 702 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 OR56A4Q8NGH8 313 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CCHCR1Q8TD31 782 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 GATA6Q92908 595 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 WNT2BQ93097 391 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 LRRC45Q96CN5 670 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 PLEKHG4BQ96PX9 1271 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 WRAP53Q9BUR4 548 aaKnown RBP9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CARD9Q9H257 536 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 ARNT2Q9HBZ2 717 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 GLOD4Q9HC38 313 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 MBNL1Q9NR56 388 aaKnown RBP9.13□□□□□ -0.95
SMC1A-203ENST00000428014 APOBEC3BQ9UH17 382 aaKnown RBP9.13□□□□□ -0.95
SMC1A-203ENST00000428014 FAM153AQ9UHL3 310 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 BTBD3Q9Y2F9 522 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 AAR2Q9Y312 384 aaKnown RBP9.13□□□□□ -0.95
SMC1A-203ENST00000428014 CACNA1BQ00975 2339 aa9.13□□□□□ -0.95
SMC1A-203ENST00000428014 MAP1BP46821 2468 aaKnown RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 LRP4O75096 1905 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 SPAARA0A1B0GVQ0 90 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 ERI2A8K979 691 aaKnown RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 K7ESM1 405 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 KCNK1O00180 336 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 ZW10O43264 779 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 KCNJ13O60928 360 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 STK10O94804 968 aaKnown RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 TNFP01375 233 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 FGF1P05230 155 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 PROS1P07225 676 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 PDHA1P08559 390 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 CCDC175P0C221 793 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 CLCNKAP51800 687 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 SRP54P61011 504 aaKnown RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 MAXP61244 160 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 PDE1BQ01064 536 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 DSC2Q02487 901 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 AP1B1Q10567 949 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 WASHC5Q12768 1159 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 BNIP3Q12983 259 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 QPCTQ16769 361 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 HENMT1Q5T8I9 393 aaKnown RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 LRRC66Q68CR7 880 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 DRICH1Q6PGQ1 229 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 TMC3Q7Z5M5 1100 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 SLCO6A1Q86UG4 719 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 C17orf82Q86X59 251 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 CDKL3Q8IVW4 592 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 LRRC8AQ8IWT6 810 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 DCBLD1Q8N8Z6 715 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 AVL9Q8NBF6 648 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 TRIM58Q8NG06 486 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 GPBAR1Q8TDU6 330 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 KRT35Q92764 455 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 FUBP1Q96AE4 644 aaKnown RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 RTP4Q96DX8 246 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 COX14Q96I36 57 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 ZSCAN5AQ9BUG6 496 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 LRRC61Q9BV99 259 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 SCNM1Q9BWG6 230 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 FRMD8Q9BZ67 464 aaPredicted RBP9.12□□□□□ -0.95
SMC1A-203ENST00000428014 NRSN2Q9GZP1 204 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 FZD3Q9NPG1 666 aa9.12□□□□□ -0.95
SMC1A-203ENST00000428014 DNAJC28Q9NX36 388 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms