RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 PHTF1Q9UMS5 762 aa5.73□□□□□ -1.49
HERPUD2-204ENST00000426180 SCML1Q9UN30 329 aa5.73□□□□□ -1.49
HERPUD2-204ENST00000426180 CA5BQ9Y2D0 317 aa5.73□□□□□ -1.49
HERPUD2-204ENST00000426180 PPIL1Q9Y3C6 166 aa5.73□□□□□ -1.49
HERPUD2-204ENST00000426180 KCTD3Q9Y597 815 aa5.73□□□□□ -1.49
HERPUD2-204ENST00000426180 PCDHGA2Q9Y5H1 932 aa5.73□□□□□ -1.49
HERPUD2-204ENST00000426180 ATXN2Q99700 1313 aaKnown RBP5.73□□□□□ -1.49
HERPUD2-204ENST00000426180 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 A0A0J9YYE9 177 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CAPN8A6NHC0 703 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 LRRC72A6NJI9 287 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 A6NJY4 79 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 METTL12A8MUP2 240 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ANKRD66B4E2M5 251 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 NEMP1O14524 444 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 TP73O15350 636 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SLC7A4O43246 635 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 BUD23O43709 281 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 AP1G1O43747 822 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 NDUFS2O75306 463 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 AVILO75366 819 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ZNF189O75820 626 aaPredicted RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ANXA9O76027 345 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SUN1O94901 812 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 HEXIM1O94992 359 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PCDH8O95206 1070 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CLDN7O95471 211 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 AP2A1O95782 977 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 TRBC1P01850 177 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 C1SP09871 688 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 C6P13671 934 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 XPAP23025 273 aaPredicted RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 VIPR1P32241 457 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ADCY8P40145 1251 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ETV3P41162 512 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 RPL21P46778 160 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 LIG3P49916 1009 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 EPHB1P54762 984 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 RPL26P61254 145 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 BASP1P80723 227 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SLC7A5Q01650 507 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 LMNB2Q03252 620 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CKAP4Q07065 602 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 MTM1Q13496 603 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SIM2Q14190 667 aaPredicted RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PRPSAP1Q14558 356 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 KCNJ11Q14654 390 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PTPRCAPQ14761 206 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PPP1R7Q15435 360 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SLC1A5Q15758 541 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CNGA3Q16281 694 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CFAP58Q5T655 872 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 RNASEH2BQ5TBB1 312 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 LRRC66Q68CR7 880 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PMS2CLQ68D20 193 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 DENND2CQ68D51 928 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 KIAA0895LQ68EN5 471 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ERAP2Q6P179 960 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 LIPIQ6XZB0 460 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PRR23BQ6ZRT6 265 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ZNF534Q76KX8 674 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CEP68Q76N32 757 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 TRIM69Q86WT6 500 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 AGGF1Q8N302 714 aaeCLIP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CBARPQ8N350 705 aaPredicted RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 TTC30BQ8N4P2 665 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 MMGT1Q8N4V1 131 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PAF1Q8N7H5 531 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 OR52K1Q8NGK4 314 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 GRK7Q8WTQ7 553 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ATOH1Q92858 354 aaPredicted RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 FUBP1Q96AE4 644 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 RAB7BQ96AH8 199 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 BIRC7Q96CA5 298 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 RMDN1Q96DB5 314 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 IFT43Q96FT9 208 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SCRN2Q96FV2 425 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SPACA7Q96KW9 195 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 COQ10AQ96MF6 247 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 HSPA12BQ96MM6 686 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PWWP2AQ96N64 755 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 MYOCQ99972 504 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 LRRC1Q9BTT6 524 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CARD6Q9BX69 1037 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 FAM126AQ9BYI3 521 aaPredicted RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 TRIM31Q9BZY9 425 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CAAP1Q9H8G2 361 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 LRRC40Q9H9A6 602 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 L2HGDHQ9H9P8 463 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 PREBQ9HCU5 417 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 FZD3Q9NPG1 666 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 MBNL1Q9NR56 388 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 VPS45Q9NRW7 570 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 HAUS2Q9NVX0 235 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 ASIC3Q9UHC3 531 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 RPL26L1Q9UNX3 145 aaKnown RBP5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SHOC2Q9UQ13 582 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SNX24Q9Y343 169 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 SHROOM3Q8TF72 1996 aa5.72□□□□□ -1.49
HERPUD2-204ENST00000426180 CACNA1IQ9P0X4 2223 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms