RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 SPATA6LQ8N4H0 392 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 RTL3Q8N8U3 475 aaKnown RBP15.22■□□□□ 0.03
C9orf3-204ENST00000424143 ZBTB8BQ8NAP8 495 aaPredicted RBP15.22■□□□□ 0.03
C9orf3-204ENST00000424143 C1orf74Q96LT6 269 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 CYP4F12Q9HCS2 524 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 RHBDL2Q9NX52 303 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 KLK14Q9P0G3 267 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 GMIPQ9P107 970 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 EBF1Q9UH73 591 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 FADS3Q9Y5Q0 445 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 SAC3D1A6NKF1 404 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 H3BMQ9 156 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 UBXN8O00124 270 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 ARPC2O15144 300 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 DNAJB5O75953 348 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 CDK14O94921 469 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 HNRNPCP07910 306 aaKnown RBP eCLIP15.21■□□□□ 0.035e-8■■□□□ 13.5
C9orf3-204ENST00000424143 SMIM10L2AP0DMW4 78 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 SMIM10L2BP0DMW5 78 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 SMPD1P17405 629 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 YY1P25490 414 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 YWHAQP27348 245 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 HTR1EP28566 365 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 RPL9P32969 192 aaKnown RBP15.21■□□□□ 0.03
C9orf3-204ENST00000424143 PGGT1BP53609 377 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 CDH15P55291 814 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 FAM117BQ6P1L5 589 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 FAM171BQ6P995 826 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 PTAR1Q7Z6K3 402 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-204ENST00000424143 GPRC5AQ8NFJ5 357 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 OR6J1Q8NGC5 347 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 TBC1D15Q8TC07 691 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 USP33Q8TEY7 942 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 HDAC10Q969S8 669 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 TMEM125Q96AQ2 219 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 HSPBAP1Q96EW2 488 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 ZNF419Q96HQ0 510 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-204ENST00000424143 COG8Q96MW5 612 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 C1QTNF3Q9BXJ4 246 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 FAM49AQ9H0Q0 323 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-204ENST00000424143 TSPYL2Q9H2G4 693 aaPredicted RBP15.21■□□□□ 0.03
C9orf3-204ENST00000424143 SLC45A1Q9Y2W3 748 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 DNAJC15Q9Y5T4 150 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 SNX10Q9Y5X0 201 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 GPR45Q9Y5Y3 372 aa15.21■□□□□ 0.03
C9orf3-204ENST00000424143 RNF103-CHMP3A0A140T963 221 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 MYBPHLA2RUH7 354 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 EEDO75530 441 aaKnown RBP15.21■□□□□ 0.02
C9orf3-204ENST00000424143 SUPT7LO94864 414 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 PRSS23O95084 383 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 CD1DP15813 335 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 PORP16435 677 aaPredicted RBP15.21■□□□□ 0.02
C9orf3-204ENST00000424143 CAPN3P20807 821 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 RPS9P46781 194 aaKnown RBP15.21■□□□□ 0.02
C9orf3-204ENST00000424143 STT3AP46977 705 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 RENBPP51606 427 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 CTBSQ01459 385 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 KCNC4Q03721 635 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 CRY1Q16526 586 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 CYBRD1Q53TN4 286 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 ZNF773Q6PK81 442 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 ARHGAP36Q6ZRI8 547 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 UMODL1-AS1Q8N2C9 162 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 TEX26Q8N6G2 289 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 OR9I1Q8NGQ6 314 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 OR13J1Q8NGT2 312 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 PATJQ8NI35 1801 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 ANKRD49Q8WVL7 239 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 TRUB1Q8WWH5 349 aaKnown RBP15.21■□□□□ 0.02
C9orf3-204ENST00000424143 ABTB1Q969K4 478 aaPredicted RBP15.21■□□□□ 0.02
C9orf3-204ENST00000424143 THAP11Q96EK4 314 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 C3orf30Q96M34 536 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 SMOC2Q9H3U7 446 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 ABHD16BQ9H3Z7 469 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 GPN2Q9H9Y4 310 aaPredicted RBP15.21■□□□□ 0.02
C9orf3-204ENST00000424143 LIN28AQ9H9Z2 209 aaKnown RBP15.21■□□□□ 0.02
C9orf3-204ENST00000424143 GOLGA2P5Q9HBQ8 144 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 ABCC13Q9NSE7 274 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 SEPT3Q9UH03 358 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 ANAPC2Q9UJX6 822 aa15.21■□□□□ 0.02
C9orf3-204ENST00000424143 GIPC1O14908 333 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 AURKAO14965 403 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 PMPCBO75439 489 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 PEX11BO96011 259 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 HPRP00739 348 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 LDLRP01130 860 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 CCR1P32246 355 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 SCNN1BP51168 640 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 SH3BP2P78314 561 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 RCAN2Q14206 197 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 RAB39AQ14964 217 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 C16orf72Q14CZ0 275 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 KIF19Q2TAC6 998 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 LAYNQ6UX15 382 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 SPPL2CQ8IUH8 684 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 CHCHD4Q8N4Q1 142 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 ARRDC4Q8NCT1 418 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 OR13F1Q8NGS4 319 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 CHPT1Q8WUD6 406 aa15.2■□□□□ 0.02
C9orf3-204ENST00000424143 TWIST2Q8WVJ9 160 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms