RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 ERVMER34-1Q9H9K5 563 aa9.68□□□□□ -0.86
HERC3-204ENST00000422770 RNF14Q9UBS8 474 aa9.68□□□□□ -0.86
HERC3-204ENST00000422770 APOBEC3BQ9UH17 382 aaKnown RBP9.68□□□□□ -0.86
HERC3-204ENST00000422770 PCOLCE2Q9UKZ9 415 aa9.68□□□□□ -0.86
HERC3-204ENST00000422770 TTC7AQ9ULT0 858 aaPredicted RBP9.68□□□□□ -0.86
HERC3-204ENST00000422770 DOLKQ9UPQ8 538 aa9.68□□□□□ -0.86
HERC3-204ENST00000422770 PCDHGB2Q9Y5G2 931 aa9.68□□□□□ -0.86
HERC3-204ENST00000422770 SCN8AQ9UQD0 1980 aa9.68□□□□□ -0.86
HERC3-204ENST00000422770 MYLKQ15746 1914 aa9.68□□□□□ -0.86
HERC3-204ENST00000422770 LAMA1P25391 3075 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 CAPN8A6NHC0 703 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 CLDN7O95471 211 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 LDOC1O95751 146 aaPredicted RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 FTH1P19P0C7X4 201 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 CTSEP14091 401 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 GPR1P46091 355 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 PFN3P60673 137 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 HNRNPKP61978 463 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC3-204ENST00000422770 YPEL5P62699 121 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 DAB2P98082 770 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 PPARDQ03181 441 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 CDK18Q07002 472 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 XRCC4Q13426 336 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 MTM1Q13496 603 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 PRPSAP1Q14558 356 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 SHBQ15464 509 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 SIX1Q15475 284 aaPredicted RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 PRRT3Q5FWE3 981 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 ITPRIPL1Q6GPH6 555 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 C8orf74Q6P047 294 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 DOK6Q6PKX4 331 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 CRTC1Q6UUV9 634 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 MACC1Q6ZN28 852 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 Q6ZVL8 140 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 PHACTR4Q8IZ21 702 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 RBFAQ8N0V3 343 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 TAB3Q8N5C8 712 aaPredicted RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 PNPLA1Q8N8W4 532 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 PRELID2Q8N945 189 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 TTC13Q8NBP0 860 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 SPATA4Q8NEY3 305 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 ATL2Q8NHH9 583 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 CCHCR1Q8TD31 782 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 SAP25Q8TEE9 199 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 TSACCQ96A04 125 aaPredicted RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 DTD2Q96FN9 168 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 SCRN2Q96FV2 425 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 IMP4Q96G21 291 aaKnown RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 CNDP2Q96KP4 475 aaKnown RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 TEKT5Q96M29 485 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 WDR92Q96MX6 357 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 KRT12Q99456 494 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 VAT1Q99536 393 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 APOOQ9BUR5 198 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 GPR63Q9BZJ6 419 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 WDR26Q9H7D7 661 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 UCKL1Q9NWZ5 548 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 KLQ9UEF7 1012 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.67□□□□□ -0.86
HERC3-204ENST00000422770 FAM153AQ9UHL3 310 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 DNPEPQ9ULA0 475 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 SHOC2Q9UQ13 582 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 APOBEC2Q9Y235 224 aaKnown RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 EFR3BQ9Y2G0 817 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 V9GYY5 206 aaPredicted RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 COL5A1P20908 1838 aaPredicted RBP9.67□□□□□ -0.86
HERC3-204ENST00000422770 KNL1Q8NG31 2342 aa9.67□□□□□ -0.86
HERC3-204ENST00000422770 NCOR2Q9Y618 2525 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 CFAP69A5D8W1 941 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 NEMP2A6NFY4 417 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 ANKRD66B4E2M5 251 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 CCDC188H7C350 402 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 K7ESM1 405 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 INPP4BO15327 924 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 AQP9O43315 295 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 LIASO43766 372 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 FZD6O60353 706 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 PIAS2O75928 621 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 RASGRP1O95267 797 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 C1SP09871 688 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 ALPPL2P10696 532 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 ZNF30P17039 623 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 DGKAP23743 735 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 GEMP55040 296 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 RPL26P61254 145 aaKnown RBP9.66□□□□□ -0.86
HERC3-204ENST00000422770 MRPS25P82663 173 aaKnown RBP9.66□□□□□ -0.86
HERC3-204ENST00000422770 WASHC5Q12768 1159 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 C1orf61Q13536 156 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 IHHQ14623 411 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 NFATC4Q14934 902 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 QPCTQ16769 361 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 DEFB133Q30KQ1 61 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 ALS2CLQ60I27 953 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 ARHGEF18Q6ZSZ5 1173 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 LYSMD3Q7Z3D4 306 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 ZNF572Q7Z3I7 529 aaPredicted RBP9.66□□□□□ -0.86
HERC3-204ENST00000422770 HEATR4Q86WZ0 1026 aa9.66□□□□□ -0.86
HERC3-204ENST00000422770 NOA1Q8NC60 698 aaKnown RBP9.66□□□□□ -0.86
HERC3-204ENST00000422770 ZNF548Q8NEK5 533 aaPredicted RBP9.66□□□□□ -0.86
HERC3-204ENST00000422770 CCDC110Q8TBZ0 833 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms