RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 HINT3Q9NQE9 182 aaKnown RBP3.94□□□□□ -1.78
LINC00397-201ENST00000422074 KCND2Q9NZV8 630 aa3.94□□□□□ -1.78
LINC00397-201ENST00000422074 SMCHD1A6NHR9 2005 aa3.94□□□□□ -1.78
LINC00397-201ENST00000422074 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 TEX13CA0A0J9YWL9 993 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 CCDC196A0A1B0GTZ2 297 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 PLEKHD1A6NEE1 506 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 IFNL4K9M1U5 179 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 LDLRAD4O15165 306 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 FTCDO95954 541 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 PAK4O96013 591 aaPredicted RBP3.93□□□□□ -1.78
LINC00397-201ENST00000422074 CDH1P12830 882 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 KCNA5P22460 613 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 TMPOP42166 694 aaKnown RBP3.93□□□□□ -1.78
LINC00397-201ENST00000422074 PITX1P78337 314 aaPredicted RBP3.93□□□□□ -1.78
LINC00397-201ENST00000422074 PHEXP78562 749 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 PTP4A2Q12974 167 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 TRPC3Q13507 836 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 GGNBP1Q5YKI7 109 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 KCTD18Q6PI47 426 aaPredicted RBP3.93□□□□□ -1.78
LINC00397-201ENST00000422074 C19orf48Q6RUI8 117 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 LCTLQ6UWM7 567 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 SLC36A4Q6YBV0 504 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 NFE4Q86UQ8 179 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 TDRPQ86YL5 185 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.93□□□□□ -1.78
LINC00397-201ENST00000422074 ZNF34Q8IZ26 560 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 RNF113BQ8IZP6 322 aaKnown RBP3.93□□□□□ -1.78
LINC00397-201ENST00000422074 SLC20A1Q8WUM9 679 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 TRMT61BQ9BVS5 477 aaKnown RBP3.93□□□□□ -1.78
LINC00397-201ENST00000422074 GGA3Q9NZ52 723 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 POU2F3Q9UKI9 436 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 GJD2Q9UKL4 321 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 ERVK-11Q9UQG0 969 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 AMDHD2Q9Y303 409 aa3.93□□□□□ -1.78
LINC00397-201ENST00000422074 USP17L23D6RBM5 183 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 C16orf97H3BN30 126 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 FGF17O60258 216 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 POLBP06746 335 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 HNRNPA1P09651 372 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 CDAP32320 146 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 IL15P40933 162 aaPredicted RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 CRIP2P52943 208 aaPredicted RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 RPP30P78346 268 aaKnown RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 DMP1Q13316 513 aaPredicted RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 GPR68Q15743 365 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 USP41Q3LFD5 358 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 SLC45A4Q5BKX6 768 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 ADAM5Q6NVV9 412 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 RGMBQ6NW40 437 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 QSOX2Q6ZRP7 698 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 TRMT1LQ7Z2T5 733 aaKnown RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 KMT5CQ86Y97 462 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 ODF3L1Q8IXM7 274 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 IL17RCQ8NAC3 791 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 OR2AK2Q8NG84 335 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 SCLT1Q96NL6 688 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 FKRPQ9H9S5 495 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 ZNF334Q9HCZ1 680 aaPredicted RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 GPR108Q9NPR9 543 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 ABCF3Q9NUQ8 709 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 LUZP4Q9P127 313 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 RALYQ9UKM9 306 aaKnown RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 TTC7AQ9ULT0 858 aaPredicted RBP3.92□□□□□ -1.78
LINC00397-201ENST00000422074 TCF19Q9Y242 345 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 CEPT1Q9Y6K0 416 aa3.92□□□□□ -1.78
LINC00397-201ENST00000422074 CYSRT1A8MQ03 144 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 TSPAN4O14817 238 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 NCAM2O15394 837 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CFC1BP0CG36 223 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CFC1P0CG37 223 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CETPP11597 493 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 ITGA2P17301 1181 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CNTFP26441 200 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 BDKRB2P30411 391 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CPOXP36551 454 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CDKN1AP38936 164 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 PPM1FP49593 454 aaPredicted RBP3.91□□□□□ -1.78
LINC00397-201ENST00000422074 GALNT2Q10471 571 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 NAE1Q13564 534 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 C6orf141Q5SZD1 244 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 METTL27Q8N6F8 245 aaPredicted RBP3.91□□□□□ -1.78
LINC00397-201ENST00000422074 OR13A1Q8NGR1 328 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 BBS10Q8TAM1 723 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 DUSP19Q8WTR2 217 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 KLHL29Q96CT2 875 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 HVCN1Q96D96 273 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 PABPC5Q96DU9 382 aaKnown RBP3.91□□□□□ -1.78
LINC00397-201ENST00000422074 MPHOSPH8Q99549 860 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 LRRC1Q9BTT6 524 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 NDST4Q9H3R1 872 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 LTB4R2Q9NPC1 389 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 SLC13A4Q9UKG4 626 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 PADI1Q9ULC6 663 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 GAB2Q9UQC2 676 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CYP46A1Q9Y6A2 500 aa3.91□□□□□ -1.78
LINC00397-201ENST00000422074 CTAGE9A4FU28 777 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 FAM72CH0Y354 149 aa3.9□□□□□ -1.79
LINC00397-201ENST00000422074 TNFSF14O43557 240 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms