RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 UBTD1Q9HAC8 227 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 KIF9Q9HAQ2 790 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 UBN1Q9NPG3 1134 aa4.09□□□□□ -1.76
PMS1-203ENST00000409593 A0A1W2PQM1 296 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 EIF3CLB5ME19 914 aaKnown RBP4.08□□□□□ -1.76
PMS1-203ENST00000409593 LINC01565O15544 149 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 XPNPEP2O43895 674 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 KRT10P13645 584 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 KCNA5P22460 613 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 RRM1P23921 792 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 BDKRB2P30411 391 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 ZNF132P52740 706 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 HNRNPH2P55795 449 aaKnown RBP4.08□□□□□ -1.76
PMS1-203ENST00000409593 RELQ04864 619 aaPredicted RBP4.08□□□□□ -1.76
PMS1-203ENST00000409593 SLC20A2Q08357 652 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 ZNF329Q86UD4 541 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 SATL1Q86VE3 508 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 BBS10Q8TAM1 723 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 DUSP19Q8WTR2 217 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 NR1H4Q96RI1 486 aaPredicted RBP4.08□□□□□ -1.76
PMS1-203ENST00000409593 CMKLR1Q99788 373 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 TMEM47Q9BQJ4 181 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 MCM9Q9NXL9 1143 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 C9orf78Q9NZ63 289 aaPredicted RBP4.08□□□□□ -1.76
PMS1-203ENST00000409593 AMDHD2Q9Y303 409 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 CEPT1Q9Y6K0 416 aa4.08□□□□□ -1.76
PMS1-203ENST00000409593 ARID4BQ4LE39 1312 aaPredicted RBP4.08□□□□□ -1.76
PMS1-203ENST00000409593 UTYO14607 1347 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 ZNF587BE7ETH6 402 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 VCYO14598 125 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 FTCDO95954 541 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 IGLV2-11P01706 119 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 IL7RP16871 459 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 EPHA8P29322 1005 aaPredicted RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 GNL1P36915 607 aaPredicted RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 IL15P40933 162 aaPredicted RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 RARSP54136 660 aaKnown RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 TROAPQ12815 778 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 ILF3Q12906 894 aaKnown RBP eCLIP4.07□□□□□ -1.76
PMS1-203ENST00000409593 C6orf141Q5SZD1 244 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 DSTYKQ6XUX3 929 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 ZNF771Q7L3S4 317 aaPredicted RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 GSTA5Q7RTV2 222 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 SLC9B2Q86UD5 537 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 CHERPQ8IWX8 916 aaKnown RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 KBTBD3Q8NAB2 608 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 SPATA3Q8NHX4 192 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 TBATAQ96M53 351 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 SPRY4Q9C004 299 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 CSTL1Q9H114 145 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 PRKRIP1Q9H875 184 aaPredicted RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 SLC28A3Q9HAS3 691 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 BRF2Q9HAW0 419 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 MMP25Q9NPA2 562 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 TAS2R10Q9NYW0 307 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 HAO1Q9UJM8 370 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 INTS6Q9UL03 887 aaKnown RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 LOXL2Q9Y4K0 774 aa4.07□□□□□ -1.76
PMS1-203ENST00000409593 PDS5AQ29RF7 1337 aaKnown RBP4.07□□□□□ -1.76
PMS1-203ENST00000409593 BMPR1BO00238 502 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 LMX1BO60663 402 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 EGFP01133 1207 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 UMODP07911 640 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 MCM3P25205 808 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 MT3P25713 68 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 USP41Q3LFD5 358 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 KCNT1Q5JUK3 1230 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 GPATCH4Q5T3I0 446 aaKnown RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 STPG1Q5TH74 334 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 CDC73Q6P1J9 531 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 DUS1LQ6P1R4 473 aaKnown RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 TSSK4Q6SA08 328 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 ATF7IPQ6VMQ6 1270 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 GDPD4Q6W3E5 623 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 PQLC2Q6ZP29 291 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 WDR63Q8IWG1 891 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 MUC20Q8N307 709 aaPredicted RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 LMNTD1Q8N9Z9 388 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 MAGEC3Q8TD91 643 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 SLC20A1Q8WUM9 679 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 SMARCE1Q969G3 411 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 ORAI1Q96D31 301 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 TTC14Q96N46 770 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 SEC62Q99442 399 aaKnown RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 MTERF1Q99551 399 aaKnown RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 PIP5K1AQ99755 562 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 SH3GL2Q99962 352 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 USP44Q9H0E7 712 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 PCDH9Q9HC56 1237 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 PREBQ9HCU5 417 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 ASAH2Q9NR71 780 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 PADI1Q9ULC6 663 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 CAPN7Q9Y6W3 813 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 CGNL1Q0VF96 1302 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 KRT86O43790 486 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 CDH1P12830 882 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 ATP1A3P13637 1013 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 PIP4K2AP48426 406 aaPredicted RBP4.06□□□□□ -1.76
PMS1-203ENST00000409593 CLCN3P51790 818 aa4.06□□□□□ -1.76
PMS1-203ENST00000409593 FUT6P51993 359 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms