RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 MDM4O15151 490 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 STX4Q12846 297 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 TMEM198Q66K66 360 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 PAOXQ6QHF9 649 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 ZZZ3Q8IYH5 903 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 NIPA2Q8N8Q9 360 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 PHF10Q8WUB8 498 aaKnown RBP17.66■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF512Q96ME7 567 aaPredicted RBP17.66■□□□□ 0.42
SMPD4-202ENST00000409031 IDI2Q9BXS1 227 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 CORO2BQ9UQ03 480 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 TMEM131LA2VDJ0 1609 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 MYPNQ86TC9 1320 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 K7EPI3 171 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 FGFR1P11362 822 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 MATKP42679 507 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 MVKQ03426 396 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 PRKCQQ04759 706 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 MGAT5BQ3V5L5 792 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 CD101Q93033 1021 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 BHMTQ93088 406 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 KLHL28Q9NXS3 571 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 OGDHLQ9ULD0 1010 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 BAIAP2Q9UQB8 552 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 SPTLC1O15269 473 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 AP2A1O95782 977 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 AMHP03971 560 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 ZCCHC8Q6NZY4 707 aaKnown RBP17.66■□□□□ 0.42
SMPD4-202ENST00000409031 EPGNQ6UW88 154 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 MIB1Q86YT6 1006 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 PEX5LQ8IYB4 626 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 DNERQ8NFT8 737 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 AAASQ9NRG9 546 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 AASDHPPTQ9NRN7 309 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.66■□□□□ 0.424e-7■■■□□ 17.2
SMPD4-202ENST00000409031 PFDN2Q9UHV9 154 aa17.66■□□□□ 0.42
SMPD4-202ENST00000409031 A0A1W2PRG6 482 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 UBE2QL1A1L167 161 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 FAM159BA6NKW6 160 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 PPP1R11O60927 126 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 GPR15P49685 360 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 RBM20Q5T481 1227 aaKnown RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 FAM84AQ96KN4 292 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 TUBA1CQ9BQE3 449 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 ZFP14Q9HCL3 533 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 TEX264Q9Y6I9 313 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 H0Y858 1186 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 CHRNGP07510 517 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 STT3AP46977 705 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 KPNA1P52294 538 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 ATP12AP54707 1039 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 PITRM1Q5JRX3 1037 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 OGFRL1Q5TC84 451 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 LCN1P1Q5VSP4 162 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 C12orf4Q9NQ89 552 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 EIF2B3Q9NR50 452 aaKnown RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 OXSMQ9NWU1 459 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 TOR4AQ9NXH8 423 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 PDP1Q9P0J1 537 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 H3BNH8 94 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 YAP1P46937 504 aaKnown RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 LRP10Q7Z4F1 713 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 GLT6D1Q7Z4J2 308 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.65■□□□□ 0.422e-6■■■□□ 17.7
SMPD4-202ENST00000409031 PTCD2Q8WV60 388 aaKnown RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 KBTBD7Q8WVZ9 684 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 IPCEF1Q8WWN9 437 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 ULBP1Q9BZM6 244 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 STX16-NPEPL1H3BU86 382 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 TSPAN4O14817 238 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 HPCAL1P37235 193 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 CLK2P49760 499 aaKnown RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 GNG2P59768 71 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 RELAQ04206 551 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 SMU1Q2TAY7 513 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 USP39Q53GS9 565 aaKnown RBP17.65■□□□□ 0.42
SMPD4-202ENST00000409031 TEX44Q53QW1 395 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 ZNF671Q8TAW3 534 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 GMIPQ9P107 970 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 SNX6Q9UNH7 406 aa17.65■□□□□ 0.42
SMPD4-202ENST00000409031 RFXANKO14593 260 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 T-ENOLP0DO92 83 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CD36P16671 472 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 SDC2P34741 201 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 TIFABQ6ZNK6 161 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 LPCAT1Q8NF37 534 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 MFSD3Q96ES6 412 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 PRICKLE1Q96MT3 831 aaPredicted RBP17.64■□□□□ 0.41
SMPD4-202ENST00000409031 POLR1EQ9GZS1 481 aaKnown RBP17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CHRAC1Q9NRG0 131 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CMTM6Q9NX76 183 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 SUV39H1O43463 412 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 ORC5O43913 435 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 ABCB7O75027 752 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 B3GAT3O94766 335 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 NTRK1P04629 796 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 AZGP1P25311 298 aaKnown RBP17.64■□□□□ 0.41
SMPD4-202ENST00000409031 CTSKP43235 329 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 COLEC12Q5KU26 742 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 PTCHD4Q6ZW05 846 aa17.64■□□□□ 0.41
SMPD4-202ENST00000409031 ABI2Q9NYB9 513 aaPredicted RBP17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms