RNA–Protein interactions for RNA: ENST00000400564.5

SAMSN1-202, Transcript of SAM domain, SH3 domain and nuclear localization signals 1, humanhuman

TSL 1 (best) BASIC

Gene SAMSN1, Length 1,382 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMSN1-202ENST00000400564 SNX30Q5VWJ9 437 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 SPSB3Q6PJ21 355 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 ZCCHC9Q8N567 271 aaKnown RBP4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 ZCCHC10Q8TBK6 192 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 CREB3L4Q8TEY5 395 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 FBXL8Q96CD0 374 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 PABPC5Q96DU9 382 aaKnown RBP4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 SLC25A18Q9H1K4 315 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 ESRP2Q9H6T0 727 aaKnown RBP4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 DDX31Q9H8H2 851 aaKnown RBP4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 ZNF556Q9HAH1 456 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 MAGEE1Q9HCI5 957 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 NAALADL1Q9UQQ1 740 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 FAM96BQ9Y3D0 163 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 SCN5AQ14524 2016 aa4.48□□□□□ -1.69
SAMSN1-202ENST00000400564 EME2A4GXA9 379 aaPredicted RBP4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 WNT9BO14905 357 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 KDM4BO94953 1096 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 SCGB1D1O95968 90 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 TFP02787 698 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 CYC1P08574 325 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 AGAP20933 346 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 CHATP28329 748 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 MAPK4P31152 587 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 SHMT1P34896 483 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 HOXD13P35453 343 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 EIF2S3P41091 472 aaKnown RBP4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 HARS2P49590 506 aaKnown RBP4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 GAS1P54826 345 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 MAMLD1Q13495 774 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 PRICKLE4Q2TBC4 344 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 NAA35Q5VZE5 725 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 LCTLQ6UWM7 567 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 MTSS1LQ765P7 747 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 RRM2BQ7LG56 351 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 RND1Q92730 232 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 ZNF570Q96NI8 536 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 USP44Q9H0E7 712 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 DIAPH3Q9NSV4 1193 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 SLCO3A1Q9UIG8 710 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 PIAS3Q9Y6X2 628 aa4.47□□□□□ -1.69
SAMSN1-202ENST00000400564 hCG_1807616A0A1W2PRN6 198 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 SOCS6O14544 535 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 MTA2O94776 668 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 CLDN14O95500 239 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 MT-CYBP00156 380 aaPredicted RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 DNTTP04053 509 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 MMP2P08253 660 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 G6PDP11413 515 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 DCTN2Q13561 401 aaKnown RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 WTAPQ15007 396 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 TCTN1Q2MV58 587 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 C2orf68Q2NKX9 166 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 EIF2S3LQ2VIR3 472 aaKnown RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 FAM76BQ5HYJ3 339 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 CPLX2Q6PUV4 134 aaKnown RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 PXKQ7Z7A4 578 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 ANKRD23Q86SG2 305 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 SCCPDHQ8NBX0 429 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 SPATA20Q8TB22 786 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 METTL6Q8TCB7 284 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 NOC3LQ8WTT2 800 aaKnown RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 KLHL29Q96CT2 875 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 IGSF21Q96ID5 467 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 SLITRK1Q96PX8 696 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 HAUS8Q9BT25 410 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 RETREG1Q9H6L5 497 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 BPIFA1Q9NP55 256 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 MKKSQ9NPJ1 570 aaPredicted RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 SEPT11Q9NVA2 429 aaKnown RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 TAS2R10Q9NYW0 307 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 NFKBIL1Q9UBC1 381 aaPredicted RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 RCOR1Q9UKL0 485 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 SARDHQ9UL12 918 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 A4GNTQ9UNA3 340 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 MAGED1Q9Y5V3 778 aaPredicted RBP4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 PSAT1Q9Y617 370 aa4.46□□□□□ -1.7
SAMSN1-202ENST00000400564 TAF1P21675 1872 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 SAA2-SAA4A0A096LPE2 208 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 A0A1W2PQM1 296 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 SLC16A5O15375 505 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 SEC31AO94979 1220 aaKnown RBP4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 PMS2P2O95744 297 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 SNRNP70P08621 437 aaKnown RBP4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 UBL4AP11441 157 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 DAOP14920 347 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 PORP16435 677 aaPredicted RBP4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 PEX5P50542 639 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 SNX16P57768 344 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 RPS3AP61247 264 aaKnown RBP4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 NEDD9Q14511 834 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 CALCRLQ16602 461 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 HIST2H2ACQ16777 129 aaPredicted RBP4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 AMZ1Q400G9 498 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 WDR73Q6P4I2 378 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 FOXRED2Q8IWF2 684 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 CNTROBQ8N137 903 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 ZBTB2Q8N680 514 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 AGBL3Q8NEM8 1001 aa4.45□□□□□ -1.7
SAMSN1-202ENST00000400564 NFKBIDQ8NI38 313 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms