RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 GLOD4Q9HC38 313 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SEMA4BQ9NPR2 832 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 GKN1Q9NS71 199 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CD84Q9UIB8 345 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 PHF24Q9UPV7 400 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 H3BUI4 141 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 PEX10O60683 326 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 TSHRP16473 764 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ITGA2P17301 1181 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 TFE3P19532 575 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 HK2P52789 917 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 LGALS3BPQ08380 585 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 RALGPS1Q5JS13 557 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 KYAT3Q6YP21 454 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 LONP2Q86WA8 852 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 TMEM126BQ8IUX1 230 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 EID3Q8N140 333 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 PPCDCQ96CD2 204 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ZDHHC12Q96GR4 267 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CCM2Q9BSQ5 444 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 WDR6Q9NNW5 1121 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 SDHAF3Q9NRP4 125 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CCDC88AQ3V6T2 1871 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CNOT3O75175 753 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 SERPINB7O75635 380 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 C8GP07360 202 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 RPL4P36578 427 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 MDH1P40925 334 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 MTAPQ13126 283 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 EARS2Q5JPH6 523 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 FAM171BQ6P995 826 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 KLHL24Q6TFL4 600 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 BNC2Q6ZN30 1099 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 RDH11Q8TC12 318 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 FIG4Q92562 907 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 POP5Q969H6 163 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 ANKHQ9HCJ1 492 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 DNAAF2Q9NVR5 837 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 CHKBQ9Y259 395 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 AP3D1O14617 1153 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 PEX1O43933 1283 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 VIPR1P32241 457 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CDH5P33151 784 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 HNF4AP41235 474 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ITGADQ13349 1161 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 FOXR2Q6PJQ5 311 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 RAD9BQ6WBX8 426 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 GPRIN3Q6ZVF9 776 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 PCDH20Q8N6Y1 951 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 EPS8L1Q8TE68 723 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 HMCESQ96FZ2 354 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 HHATLQ9HCP6 504 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SPATS2LQ9NUQ6 558 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 SCML2Q9UQR0 700 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ZDHHC9Q9Y397 364 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 COL2A1P02458 1487 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 TMEM265A0A087WTH1 108 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SH3BGRLO75368 114 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 PBX3P40426 434 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 RAB10P61026 200 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 RASA2Q15283 850 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 NPNTQ6UXI9 565 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 TMPRSS11BQ86T26 416 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ARID3BQ8IVW6 561 aaPredicted RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 DEFB119Q8N690 84 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 CDYL2Q8N8U2 506 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 APOPT1Q96IL0 206 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ZNF599Q96NL3 588 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 MRPL57Q9BQC6 102 aaKnown RBP7.94□□□□□ -1.14
USP47-203ENST00000399455 ZSCAN5AQ9BUG6 496 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 RXFP1Q9HBX9 757 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 SLC9A8Q9Y2E8 581 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 NOX1Q9Y5S8 564 aa7.94□□□□□ -1.14
USP47-203ENST00000399455 ARFGEF2Q9Y6D5 1785 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 LEFTY2O00292 366 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 TRIM13O60858 407 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 KERAO60938 352 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 GIMD1P0DJR0 217 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 PPIBP23284 216 aaKnown RBP7.93□□□□□ -1.14
USP47-203ENST00000399455 MAPK10P53779 464 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 NFATC2Q13469 925 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 FGL2Q14314 439 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ANGPT1Q15389 498 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 VPS26BQ4G0F5 336 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 CCNYL2Q5T2Q4 361 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 CDKAL1Q5VV42 579 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 TMEM220Q6QAJ8 160 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 RTL10Q7L3V2 364 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 SLC29A4Q7RTT9 530 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 EPHX4Q8IUS5 362 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 AADATQ8N5Z0 425 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ATG16L2Q8NAA4 619 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 OR10H5Q8NGA6 315 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 TRPC4APQ8TEL6 797 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 NACC2Q96BF6 587 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 ZNF354BQ96LW1 612 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.93□□□□□ -1.14
USP47-203ENST00000399455 ST6GALNAC4Q9H4F1 302 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 PNPLA8Q9NP80 782 aa7.93□□□□□ -1.14
USP47-203ENST00000399455 COL20A1Q9P218 1284 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms