RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 BRSK1Q8TDC3 778 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 CAPZA3Q96KX2 299 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 GDF3Q9NR23 364 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 COQ6Q9Y2Z9 468 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 TP53BP1Q12888 1972 aaPredicted RBP17.65■□□□□ 0.42
CTNS-203ENST00000399306 LAMA1P25391 3075 aa17.65■□□□□ 0.42
CTNS-203ENST00000399306 A0A1B0GVT2 93 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 POM121BA6NF01 834 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 A8MX80 341 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 E7EVH7 732 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 F5H423 210 aaPredicted RBP17.64■□□□□ 0.41
CTNS-203ENST00000399306 ECEL1O95672 775 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 KRT14P02533 472 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 THEGLP0DJG4 465 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 TPSB2P20231 275 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 ETV3P41162 512 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 CHRNA4P43681 627 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 RXRGP48443 463 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 BNC1Q01954 994 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 SEMG2Q02383 582 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 LAMB3Q13751 1172 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 PTK2BQ14289 1009 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 SF3A2Q15428 464 aaKnown RBP17.64■□□□□ 0.41
CTNS-203ENST00000399306 TPSAB1Q15661 275 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 PDPK2PQ6A1A2 396 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 PNCKQ6P2M8 343 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 Q6ZVL8 140 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 LYSMD3Q7Z3D4 306 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 PLEKHG4BQ96PX9 1271 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 GPR63Q9BZJ6 419 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 FZD3Q9NPG1 666 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 MBNL1Q9NR56 388 aaKnown RBP17.64■□□□□ 0.41
CTNS-203ENST00000399306 DNAAF2Q9NVR5 837 aaKnown RBP17.64■□□□□ 0.41
CTNS-203ENST00000399306 CDC23Q9UJX2 597 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 SCN8AQ9UQD0 1980 aa17.64■□□□□ 0.41
CTNS-203ENST00000399306 PDE2AO00408 941 aaPredicted RBP17.63■□□□□ 0.41
CTNS-203ENST00000399306 CRTAMO95727 393 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 ZSCAN5DPP0CG00 497 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 ETS1P14921 441 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 SDHBP21912 280 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 KIAA1024LP59773 190 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 CDH17Q12864 832 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 SLC14A1Q13336 389 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 DHX34Q14147 1143 aaKnown RBP17.63■□□□□ 0.41
CTNS-203ENST00000399306 TAF1AQ15573 450 aaPredicted RBP17.63■□□□□ 0.41
CTNS-203ENST00000399306 CCDC6Q16204 474 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 KIF19Q2TAC6 998 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 HENMT1Q5T8I9 393 aaKnown RBP17.63■□□□□ 0.41
CTNS-203ENST00000399306 FAXCQ5TGI0 409 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 Q6ZSR6 202 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 GLT6D1Q7Z4J2 308 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 TTC30BQ8N4P2 665 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 SLC25A41Q8N5S1 370 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 OR13H1Q8NG92 308 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 SMIM14Q96QK8 99 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 APOOQ9BUR5 198 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 EDEM2Q9BV94 578 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 ABCG8Q9H221 673 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 SMOC1Q9H4F8 434 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 FAM83DQ9H4H8 585 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 IL17CQ9P0M4 197 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 PCDHGB2Q9Y5G2 931 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 SPO11Q9Y5K1 396 aa17.63■□□□□ 0.41
CTNS-203ENST00000399306 ADAMTS9Q9P2N4 1935 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 SPTY2D1-AS1A0A0U1RR47 76 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 C2orf81A6NN90 581 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 H0Y8X5 98 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 APRTP07741 180 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 KELP23276 732 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 PSMA3P25788 255 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 HOXD11P31277 338 aaPredicted RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 LMAN1P49257 510 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 ATXN3P54252 364 aaPredicted RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 CLDN2P57739 230 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 CKAP4Q07065 602 aaKnown RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 PTK6Q13882 451 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 INPP5AQ14642 412 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 PTPRRQ15256 657 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 AASDHQ4L235 1098 aaPredicted RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 TCEAL6Q6IPX3 200 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 ADAMTSL4Q6UY14 1074 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 MACC1Q6ZN28 852 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 PTAR1Q7Z6K3 402 aaPredicted RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 ALYREFQ86V81 257 aaKnown RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 TCEAL3Q969E4 200 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 AP2M1Q96CW1 435 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 EID2BQ96D98 161 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 TBATAQ96M53 351 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 ELF4Q99607 663 aaPredicted RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 ZSCAN5AQ9BUG6 496 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 TEX101Q9BY14 249 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 DDX47Q9H0S4 455 aaKnown RBP17.62■□□□□ 0.41
CTNS-203ENST00000399306 TMEM9BQ9NQ34 198 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 CASS4Q9NQ75 786 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 RIMKLBQ9ULI2 386 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 SNX11Q9Y5W9 270 aa17.62■□□□□ 0.41
CTNS-203ENST00000399306 CDX4O14627 284 aaPredicted RBP17.61■□□□□ 0.41
CTNS-203ENST00000399306 LPOP22079 712 aaPredicted RBP17.61■□□□□ 0.41
CTNS-203ENST00000399306 HTR1BP28222 390 aa17.61■□□□□ 0.41
CTNS-203ENST00000399306 ARRB1P49407 418 aaPredicted RBP17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms