RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 GLTPD2A6NH11 291 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SAGE2PA6NJ88 616 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PPP6CO00743 305 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 NRP2O60462 931 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 VPS26AO75436 327 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ITGB1P05556 798 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RHOQP17081 205 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 KCNA5P22460 613 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CYP2C18P33260 490 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 INPP1P49441 399 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PHEXP78562 749 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PTPRNQ16849 979 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MYLK3Q32MK0 819 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 UNC50Q53HI1 259 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ALFQ53S48 1182 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PTRHD1Q6GMV3 140 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PGM2L1Q6PCE3 622 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 LINGO4Q6UY18 593 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FAM162AQ96A26 154 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MS4A4AQ96JQ5 239 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SLC9A7Q96T83 725 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 IL12RB2Q99665 862 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 GPR21Q99679 349 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TBCDQ9BTW9 1192 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 HGH1Q9BTY7 390 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PCDHB8Q9UN66 801 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ZFP37Q9Y6Q3 630 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 A0A1B0GVG6 124 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PYGLP06737 847 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 YAP1P46937 504 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ARSDP51689 593 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 GRB7Q14451 532 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TSNQ15631 228 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MAPRE1Q15691 268 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 C18orf21Q32NC0 220 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 LDLRAD1Q5T700 205 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PRSS55Q6UWB4 352 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF467Q7Z7K2 595 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 KDM1BQ8NB78 822 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FBXO30Q8TB52 745 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TMIGD2Q96BF3 282 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF512Q96ME7 567 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SPATA16Q9BXB7 569 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 C1QTNF1Q9BXJ1 281 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MRPS26Q9BYN8 205 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 NDUFA13Q9P0J0 144 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 COL4A5P29400 1685 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CDC7O00311 574 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SYNCRIPO60506 623 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RPP40O75818 363 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ATP6V1B2P21281 511 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PBX3P40426 434 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RENBPP51606 427 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FCGRTP55899 365 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TAF10Q12962 218 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 C6orf10Q5SRN2 563 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 OGFRL1Q5TC84 451 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 LPCAT2Q7L5N7 544 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PIWIL4Q7Z3Z4 852 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CLEC14AQ86T13 490 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RALGPS2Q86X27 583 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ANKRD49Q8WVL7 239 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CCDC126Q96EE4 140 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 UROC1Q96N76 676 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FAM210AQ96ND0 272 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SYT17Q9BSW7 474 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 OSBPL2Q9H1P3 480 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SNX6Q9UNH7 406 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ZNF711Q9Y462 761 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PCDHGC4Q9Y5F7 938 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 I6L893 689 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PARNO95453 639 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 ELNP15502 786 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CLCQ05315 142 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TLR1Q15399 786 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 FOXB2Q5VYV0 432 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 OR52E8Q6IFG1 317 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 KIAA1841Q6NSI8 718 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 TMEM135Q86UB9 458 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MYH4Q9Y623 1939 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CD3EAPO15446 510 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MAFKO60675 156 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 E2F6O75461 281 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CPSF4O95639 269 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CNPP09543 421 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 MC4RP32245 332 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CDKN2DP55273 166 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 SLC9A5Q14940 896 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 OTUD3Q5T2D3 398 aaPredicted RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PIK3R6Q5UE93 754 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PM20D1Q6GTS8 502 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 GLT6D1Q7Z4J2 308 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 GPR141Q7Z602 305 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 CLEC4FQ8N1N0 589 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 OR4L1Q8NH43 312 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RNF145Q96MT1 663 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 PTPN18Q99952 460 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 RTP3Q9BQQ7 232 aa4.93□□□□□ -1.62
SMAD4-202ENST00000398417 POLR1EQ9GZS1 481 aaKnown RBP4.93□□□□□ -1.62
SMAD4-202ENST00000398417 GKN1Q9NS71 199 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms