RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 PRR11Q96HE9 360 aaPredicted RBP11.06□□□□□ -0.64
HPS4-202ENST00000398145 OR52E6Q96RD3 313 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 HIPK3Q9H422 1215 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 TLE6Q9H808 572 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 TIMM22Q9Y584 194 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 PTCH2Q9Y6C5 1203 aa11.06□□□□□ -0.64
HPS4-202ENST00000398145 E7ENX8 843 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 PRRG1O14668 218 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 TULP3O75386 442 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 TNFRSF21O75509 655 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 IMPDH2P12268 514 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 CYP4B1P13584 511 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 DGKAP23743 735 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 SEPHS1P49903 392 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ATXN1P54253 815 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 SIM2Q14190 667 aaPredicted RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 ZNF460Q14592 562 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 PCLAFQ15004 111 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 C9orf57Q5W0N0 161 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 AFTPHQ6ULP2 937 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.05□□□□□ -0.64
HPS4-202ENST00000398145 STARD8Q92502 1023 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 RNFT2Q96EX2 444 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 OLFM1Q99784 485 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 HERPUD2Q9BSE4 406 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ZYG11BQ9C0D3 744 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 PTBP2Q9UKA9 531 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 ADAMTS6Q9UKP5 1117 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 CNOT6Q9ULM6 557 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 OAZ3Q9UMX2 235 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 KLHL20Q9Y2M5 609 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 TCAF1Q9Y4C2 921 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 PENKP01210 267 aaPredicted RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 FTH1P02794 183 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 FGF1P05230 155 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 HOXC6P09630 235 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 MYL12AP19105 171 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 CDC42P60953 191 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 BNIP3Q12983 259 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 TRIM32Q13049 653 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 LCP2Q13094 533 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 GPR180Q86V85 440 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 MARVELD2Q8N4S9 558 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 MCOLN3Q8TDD5 553 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ABHD16BQ9H3Z7 469 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 GBA2Q9HCG7 927 aaPredicted RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 TRIM39Q9HCM9 518 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ARFGEF2Q9Y6D5 1785 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 PIPSLA2A3N6 862 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 NEMP2A6NFY4 417 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 SAGE2PA6NJ88 616 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 PDLIM1O00151 329 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 CXCL11O14625 94 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 CCNKO75909 580 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 STAU1O95793 577 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 ALDH1A1P00352 501 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 COX7A2P14406 83 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 MAGP20916 626 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 YWHAQP27348 245 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 GPC1P35052 558 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ADCYAP1R1P41586 468 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 SLC16A1P53985 500 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ALDH6A1Q02252 535 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 PCBP1Q15365 356 aaKnown RBP eCLIP11.05□□□□□ -0.64
HPS4-202ENST00000398145 ZNF829Q3KNS6 432 aaPredicted RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 KLHL17Q6TDP4 642 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ANKRD23Q86SG2 305 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 FAM35AQ86V20 835 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 P2RY8Q86VZ1 359 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 LGI2Q8N0V4 545 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ARL10Q8N8L6 244 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 HDHD2Q9H0R4 259 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 MIEF1Q9NQG6 463 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 MARCH2Q9P0N8 246 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 SH3BP1Q9Y3L3 701 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 PCDHB5Q9Y5E4 795 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.641e-7■■■■■ 66.8
HPS4-202ENST00000398145 ZNF541Q9H0D2 1346 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 GOLGA4Q13439 2230 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 TRIM43BA6NCK2 446 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 BCKDKO14874 412 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 RGS10O43665 173 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 DNAJA2O60884 412 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 ANXA5P08758 320 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 GLUD2P49448 558 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 FGD3Q5JSP0 725 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 BRMS1LQ5PSV4 323 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 C1orf220Q5T0J3 134 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 RETSATQ6NUM9 610 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 TOP6BLQ8N6T0 577 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 GANCQ8TET4 914 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 YTHDF1Q9BYJ9 559 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 ZBTB26Q9HCK0 441 aa11.05□□□□□ -0.64
HPS4-202ENST00000398145 WBP11Q9Y2W2 641 aaKnown RBP11.05□□□□□ -0.64
HPS4-202ENST00000398145 H3BMM5 538 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 AREL1O15033 823 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 UGT2B11O75310 529 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 FGF3P11487 239 aaPredicted RBP11.04□□□□□ -0.64
HPS4-202ENST00000398145 CYP2A7P20853 494 aa11.04□□□□□ -0.64
HPS4-202ENST00000398145 GJA8P48165 433 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms