RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 VCLP18206 1134 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SLC6A4P31645 630 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PTK2BQ14289 1009 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FASTKQ14296 549 aaKnown RBP18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FAM45BPQ6NSW5 357 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CYHR1Q6ZMK1 362 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GALNT7Q86SF2 657 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TMEM173Q86WV6 379 aaPredicted RBP18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 OR9I1Q8NGQ6 314 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FAM45AQ8TCE6 357 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TMEM161AQ9NX61 479 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 THSD7BQ9C0I4 1608 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 OR6C75A6NL08 312 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GPC4O75487 556 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 HSPA1AP0DMV8 641 aaKnown RBP18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 HSPA1BP0DMV9 641 aaKnown RBP18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GJA8P48165 433 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TNK2Q07912 1038 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MMEL1Q495T6 779 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 TAS1R1Q7RTX1 841 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 NSMCE3Q96MG7 304 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SMIM14Q96QK8 99 aa18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 COPS7BQ9H9Q2 264 aaPredicted RBP18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 POLR3BQ9NW08 1133 aaPredicted RBP18.34■□□□□ 0.53
CHRFAM7A-202ENST00000397827 A0A0J9YVX5 310 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PSMD12O00232 456 aaPredicted RBP18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 CD1DP15813 335 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FDXRP22570 491 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SLC11A1P49279 550 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 YBEYP58557 167 aaPredicted RBP18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 GPR17Q13304 367 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PDAP1Q13442 181 aaKnown RBP18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 UNC50Q53HI1 259 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 OGFRL1Q5TC84 451 aaPredicted RBP18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 DUS1LQ6P1R4 473 aaKnown RBP18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 AFAP1L2Q8N4X5 818 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 NAT14Q8WUY8 206 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 MPP4Q96JB8 637 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 FAR2Q96K12 515 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 C3orf30Q96M34 536 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 KLHL32Q96NJ5 620 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 SPON2Q9BUD6 331 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PDFQ9HBH1 243 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 WDR37Q9Y2I8 494 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 DTNAQ9Y4J8 743 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 PCDHGA7Q9Y5G6 932 aa18.33■□□□□ 0.53
CHRFAM7A-202ENST00000397827 F5H5T6 163 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FBP2O00757 339 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ALDH2P05091 517 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FGF1P05230 155 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 HLA-DPA1P20036 260 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RGRP47804 291 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TMED1Q13445 227 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FBXL19Q6PCT2 694 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PRSS55Q6UWB4 352 aaPredicted RBP18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ICA1LQ8NDH6 482 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 NMD3Q96D46 503 aaKnown RBP18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FEM1CQ96JP0 617 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PTGDR2Q9Y5Y4 395 aa18.33■□□□□ 0.52
CHRFAM7A-202ENST00000397827 E7ENX8 843 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 H3BMM5 538 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SERPINF2P08697 491 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ATF6P18850 670 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FGFR3P22607 806 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MAPKAPK2P49137 400 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PSME3P61289 254 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ACVR1Q04771 509 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RFTN1Q14699 578 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 OR4D1Q15615 310 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FBXO48Q5FWF7 155 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 MRNIPQ6NTE8 343 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 FUT10Q6P4F1 479 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PAOXQ6QHF9 649 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 LAYNQ6UX15 382 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 LILRA2Q8N149 483 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PTGR2Q8N8N7 351 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 DBF4BQ8NFT6 615 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 OR4L1Q8NH43 312 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 BRSK1Q8TDC3 778 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PCDHAC1Q9H158 963 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 C6orf203Q9P0P8 240 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ZFP37Q9Y6Q3 630 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 UBA6A0AVT1 1052 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 UBXN8O00124 270 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 ACOT8O14734 319 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RPP40O75818 363 aaKnown RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 HOXD9P28356 352 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PMLP29590 882 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SH3BGRP55822 239 aaPredicted RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RPS24P62847 133 aaKnown RBP18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SH3BP2P78314 561 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 RING1Q06587 406 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 SQLEQ14534 574 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 LRGUKQ96M69 825 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CATSPERZQ9NTU4 200 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 CACNA2D2Q9NY47 1150 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 PCDHB7Q9Y5E2 793 aa18.32■□□□□ 0.52
CHRFAM7A-202ENST00000397827 TET1Q8NFU7 2136 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms