RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 GNPDA1P46926 289 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 PMS2P54278 862 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 CDO1Q16878 200 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 PARP15Q460N3 678 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 STRADAQ7RTN6 431 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 MAMDC2Q7Z304 686 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-202ENST00000396629 SRLQ86TD4 932 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 CCDC185Q8N715 623 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 MSANTD4Q8NCY6 345 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 PTCD2Q8WV60 388 aaKnown RBP8.42□□□□□ -1.06
SCFD1-202ENST00000396629 RXFP2Q8WXD0 754 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 SCARF2Q96GP6 870 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-202ENST00000396629 PDCL3Q9H2J4 239 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 ATP13A3Q9H7F0 1226 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 SUDS3Q9H7L9 328 aaPredicted RBP8.42□□□□□ -1.06
SCFD1-202ENST00000396629 GDPD2Q9HCC8 539 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 METTL5Q9NRN9 209 aaKnown RBP8.42□□□□□ -1.06
SCFD1-202ENST00000396629 KCTD5Q9NXV2 234 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 HOOK1Q9UJC3 728 aaKnown RBP8.42□□□□□ -1.06
SCFD1-202ENST00000396629 POLHQ9Y253 713 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 SLC17A4Q9Y2C5 497 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 CELSR2Q9HCU4 2923 aa8.42□□□□□ -1.06
SCFD1-202ENST00000396629 A8MU76 341 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 LSM8O95777 96 aaKnown RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 RECKO95980 971 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 CYP11B1P15538 503 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 COL8A1P27658 744 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 TEAD1P28347 426 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 ERCC5P28715 1186 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 SERPINA4P29622 427 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 PTPN9P43378 593 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 RGRP47804 291 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 PAK1Q13153 545 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 ACOX1Q15067 660 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 DPY19L2P1Q6NXN4 242 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 APLFQ8IW19 511 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 FAM114A1Q8IWE2 563 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 UMODL1-AS1Q8N2C9 162 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 CBARPQ8N350 705 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 OR10G6Q8NH81 332 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 AHCYL2Q96HN2 611 aaKnown RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 PLEKHM1Q9Y4G2 1056 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 ATP6V1DQ9Y5K8 247 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 ANKRD17O75179 2603 aaKnown RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 LRBAP50851 2863 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 WIPF3A6NGB9 483 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 C2CD4BA6NLJ0 364 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 J3KR12 359 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 TRAFD1O14545 582 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 PRAMEF11O60813 436 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 CLDN1O95832 211 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 POU3F2P20265 443 aaPredicted RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 EPHB2P29323 1055 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 SDC4P31431 198 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 DLSTP36957 453 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 ACTR1BP42025 376 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 HDAC4P56524 1084 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 ACTR1AP61163 376 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 POLR2LP62875 67 aaKnown RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 NOMO3P69849 1222 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 CDK3Q00526 305 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 SNAP47Q5SQN1 464 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 CRYBG3Q68DQ2 2970 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 PYROXD2Q8N2H3 581 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 NUS1Q96E22 293 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 SLC38A3Q99624 504 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 LRRC19Q9H756 370 aa8.41□□□□□ -1.06
SCFD1-202ENST00000396629 SIDT1Q9NXL6 827 aaKnown RBP8.41□□□□□ -1.06
SCFD1-202ENST00000396629 FAM170AA1A519 330 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 POLR1CO15160 346 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-202ENST00000396629 SORBS2O94875 1100 aaKnown RBP8.4□□□□□ -1.06
SCFD1-202ENST00000396629 TNFRSF8P28908 595 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 POLD2P49005 469 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 RIPPLY3P57055 190 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 BCL2L1Q07817 233 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 ERV3-1Q14264 604 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 C6orf15Q6UXA7 325 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-202ENST00000396629 SLFN11Q7Z7L1 901 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 ZNF761Q86XN6 746 aaPredicted RBP8.4□□□□□ -1.06
SCFD1-202ENST00000396629 SFRP1Q8N474 314 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 JOSD2Q8TAC2 188 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 GPT2Q8TD30 523 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 SLC37A2Q8TED4 501 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 CPA5Q8WXQ8 436 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 NSMCE3Q96MG7 304 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 B4GALT6Q9UBX8 382 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 CROTQ9UKG9 612 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 SRPK3Q9UPE1 567 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 PCDHGA6Q9Y5G7 932 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 CENPEQ02224 2701 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 HIVEP3Q5T1R4 2406 aa8.4□□□□□ -1.06
SCFD1-202ENST00000396629 A8MX80 341 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 ZNF28P17035 718 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 NSUN2Q08J23 767 aaKnown RBP eCLIP8.39□□□□□ -1.07
SCFD1-202ENST00000396629 CNGA3Q16281 694 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 TAF3Q5VWG9 929 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 NAA35Q5VZE5 725 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 LYSMD3Q7Z3D4 306 aa8.39□□□□□ -1.07
SCFD1-202ENST00000396629 PHLDB2Q86SQ0 1253 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms