RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 CLDN11O75508 207 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 SIX3O95343 332 aaPredicted RBP16.54■□□□□ 0.24
TRIM39-205ENST00000396551 F11P03951 625 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 RHOCP08134 193 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 ART3Q13508 389 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 PTK2BQ14289 1009 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 LRRC43Q8N309 656 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 AFAP1L2Q8N4X5 818 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 PTGR2Q8N8N7 351 aaPredicted RBP16.54■□□□□ 0.24
TRIM39-205ENST00000396551 PDZD8Q8NEN9 1154 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 OR4K2Q8NGD2 314 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 ATOH8Q96SQ7 321 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 TDRD1Q9BXT4 1180 aaKnown RBP16.54■□□□□ 0.24
TRIM39-205ENST00000396551 EBF3Q9H4W6 596 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 POPDC3Q9HBV1 291 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 IKZF3Q9UKT9 509 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 UBDO15205 165 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 MT-CO1P00395 513 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 HDCP19113 662 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 UGT3A2Q3SY77 523 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 KLHDC10Q6PID8 442 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 C16orf59Q7L2K0 433 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 OVCA2Q8WZ82 227 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 PLD4Q96BZ4 506 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 RMDN1Q96DB5 314 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 TMA16Q96EY4 203 aaKnown RBP16.54■□□□□ 0.24
TRIM39-205ENST00000396551 C3orf30Q96M34 536 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 RETREG1Q9H6L5 497 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 ZDHHC7Q9NXF8 308 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 DLGAP2Q9P1A6 1054 aa16.54■□□□□ 0.24
TRIM39-205ENST00000396551 ILVBLA1L0T0 632 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CASQ2O14958 399 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 SMIM24O75264 130 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CRTAMO95727 393 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 IRF1P10914 325 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 TUFMP49411 452 aaKnown RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CDKN1CP49918 316 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 SQLEQ14534 574 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 USP41Q3LFD5 358 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 GLT6D1Q7Z4J2 308 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 SDCCAG8Q86SQ7 713 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 RNF168Q8IYW5 571 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 LPGAT1Q92604 370 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CLSTN3Q9BQT9 956 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 TRPC7Q9HCX4 862 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 AGO1Q9UL18 857 aaKnown RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 UBA6A0AVT1 1052 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 FBP2O00757 339 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 HOXB8P17481 243 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 PAX7P23759 505 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 PMLP29590 882 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 SH3BP2P78314 561 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 PDAP1Q13442 181 aaKnown RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 PTPRRQ15256 657 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 LARP4Q71RC2 724 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 SPDL1Q96EA4 605 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 KLHL4Q9C0H6 718 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 SCUBE2Q9NQ36 999 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 INTS10Q9NVR2 710 aaKnown RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 PCDHGC4Q9Y5F7 938 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 BACE2Q9Y5Z0 518 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 ATP6AP2A0A1C7CYW4 349 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 C2orf78A6NCI8 922 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CBX4O00257 560 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 ATP6AP2O75787 350 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CDK14O94921 469 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CD160O95971 181 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 FMO4P31512 558 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 FLOT2Q14254 428 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 TAF1AQ15573 450 aaPredicted RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CXorf57Q6NSI4 855 aaKnown RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 SLAIN1Q8ND83 568 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 CEP295NLQ96MC4 621 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 NSUN5Q96P11 429 aaKnown RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 FBRSL1Q9HCM7 1045 aaKnown RBP16.53■□□□□ 0.24
TRIM39-205ENST00000396551 PCDHGA7Q9Y5G6 932 aa16.53■□□□□ 0.24
TRIM39-205ENST00000396551 PSMA3P25788 255 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 AQP4P55087 323 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 CCL23P55773 120 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 FASTKQ14296 549 aaKnown RBP16.52■□□□□ 0.24
TRIM39-205ENST00000396551 TRIP10Q15642 601 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 GSTA3Q16772 222 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 PAQR3Q6TCH7 311 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.24
TRIM39-205ENST00000396551 LPCAT1Q8NF37 534 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 RHEBL1Q8TAI7 183 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 CWH43Q9H720 699 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 GALPQ9UBC7 116 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 PSMD13Q9UNM6 376 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 TBC1D30Q9Y2I9 924 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 COL4A6Q14031 1691 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 PLXNA4Q9HCM2 1894 aa16.52■□□□□ 0.24
TRIM39-205ENST00000396551 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.52■□□□□ 0.23
TRIM39-205ENST00000396551 PSMD12O00232 456 aaPredicted RBP16.52■□□□□ 0.23
TRIM39-205ENST00000396551 UBTFL6P0CB48 400 aaPredicted RBP16.52■□□□□ 0.23
TRIM39-205ENST00000396551 ME2P23368 584 aa16.52■□□□□ 0.23
TRIM39-205ENST00000396551 MRPS22P82650 360 aaKnown RBP16.52■□□□□ 0.23
TRIM39-205ENST00000396551 ARF5P84085 180 aa16.52■□□□□ 0.23
TRIM39-205ENST00000396551 ILF2Q12905 390 aaKnown RBP16.52■□□□□ 0.23
TRIM39-205ENST00000396551 ZNF177Q13360 481 aaPredicted RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms