RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 TTLQ8NG68 377 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 DCAKDQ8WVC6 231 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RASSF5Q8WWW0 418 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 IL12RB2Q99665 862 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 UGT2B28Q9BY64 529 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MPP6Q9NZW5 540 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TCAF1Q9Y4C2 921 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MGAT4DA6NG13 374 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 E2F6O75461 281 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FGF18O76093 207 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ENO2P09104 434 aaPredicted RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 PRDX6P30041 224 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TAF5Q15542 800 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SYPL2Q5VXT5 272 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CAPRIN2Q6IMN6 1127 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FAM92BQ6ZTR7 304 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SIGLEC10Q96LC7 697 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 MYRFLQ96LU7 910 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 APOL2Q9BQE5 337 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 RAB11FIP5Q9BXF6 653 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ZCWPW1Q9H0M4 648 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 HMGXB4Q9UGU5 601 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 NR2E1Q9Y466 385 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 YIPF1Q9Y548 306 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SCN2AQ99250 2005 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ZSWIM8A7E2V4 1837 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SUPT3HB4E1H0 165 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 BPGMP07738 259 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 DLDP09622 509 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 SPAM1P38567 509 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ABRQ12979 859 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 FBXO43Q4G163 708 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 NIPAL1Q6NVV3 410 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 C14orf80Q86SX3 495 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 CELF6Q96J87 481 aaKnown RBP3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TCF25Q9BQ70 676 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ARMC7Q9H6L4 198 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 ZFP14Q9HCL3 533 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 TMEM216Q9P0N5 145 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 IRAK3Q9Y616 596 aa3.39□□□□□ -1.87
VPS13C-203ENST00000395896 LYPLA1O75608 230 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PRAMEF1O95521 474 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TIMP1P01033 207 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 GYS2P54840 703 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TP53BP2Q13625 1128 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 DPYSQ14117 519 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NR6A1Q15406 480 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RASIP1Q5U651 963 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 OTOP3Q7RTS5 596 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 USP33Q8TEY7 942 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MARCOQ9UEW3 520 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 FAM92AA1XBS5 289 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF840PA6NDX5 716 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 NPHS1O60500 1241 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CCNFP41002 786 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TTMPQ5BVD1 217 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 KDELC2Q7Z4H8 507 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MTDHQ86UE4 582 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ZNF598Q86UK7 904 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MDM1Q8TC05 714 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SMG7Q92540 1137 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MIOSQ9NXC5 875 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SMPD4Q9NXE4 827 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RPA3P35244 121 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ADARP55265 1226 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 FAAP100Q0VG06 881 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 BNIP2Q12982 314 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PRKD1Q15139 912 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SCAMP5Q8TAC9 235 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TRIB3Q96RU7 358 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC28BQ9BUN5 200 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MOCS1Q9NZB8 636 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CRYL1Q9Y2S2 319 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RAI2Q9Y5P3 530 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CCDC160A6NGH7 325 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 BHMG1C9JSJ3 638 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TRIM16O95361 564 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CTSAP10619 480 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 LEPRP48357 1165 aaKnown RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 HPCAP84074 193 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CHRNB3Q05901 458 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 TSTD2Q5T7W7 516 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PIGWQ7Z7B1 504 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CHPFQ8IZ52 775 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 LPCAT1Q8NF37 534 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MFSD3Q96ES6 412 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CDKN2AIPNLQ96HQ2 116 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 RNF39Q9H2S5 420 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ECT2Q9H8V3 914 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SIRPGQ9P1W8 387 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 ADGRE2Q9UHX3 823 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SPG11Q96JI7 2443 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CHD5Q8TDI0 1954 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 BTN3A1O00481 513 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 CCND3P30281 292 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SLC18A2Q05940 514 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 MAPKAPK3Q16644 382 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 BNC2Q6ZN30 1099 aaPredicted RBP3.38□□□□□ -1.87
VPS13C-203ENST00000395896 PLPP6Q8IY26 295 aa3.38□□□□□ -1.87
VPS13C-203ENST00000395896 SLC25A41Q8N5S1 370 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms