RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 IL15P40933 162 aaPredicted RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 HALP42357 657 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 METAP2P50579 478 aaKnown RBP eCLIP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 CDH15P55291 814 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 ISL1P61371 349 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 PITX1P78337 314 aaPredicted RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 OS9Q13438 667 aaPredicted RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 BIRC2Q13490 618 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 ZNF280DQ6N043 979 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 KCTD18Q6PI47 426 aaPredicted RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 LRRTM4Q86VH4 590 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 KMT5CQ86Y97 462 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 SPATA6LQ8N4H0 392 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 ZBTB10Q96DT7 871 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 ZNF583Q96ND8 569 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 MPHOSPH8Q99549 860 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 GPR108Q9NPR9 543 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 HINT3Q9NQE9 182 aaKnown RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 DDX43Q9NXZ2 648 aaKnown RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 SLC25A10Q9UBX3 287 aaPredicted RBP3.25□□□□□ -1.89
TRAV40-201ENST00000390467 POU2F3Q9UKI9 436 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 TCF19Q9Y242 345 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 SNED1Q8TER0 1413 aa3.25□□□□□ -1.89
TRAV40-201ENST00000390467 TEX13CA0A0J9YWL9 993 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 FAM72CH0Y354 149 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 TAF4O00268 1085 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 SERPINB2P05120 415 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 BDKRB2P30411 391 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 CDKN1AP38936 164 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 RGS19P49795 217 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 UFM1P61960 85 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 SORDQ00796 357 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.24□□□□□ -1.89
TRAV40-201ENST00000390467 FCN2Q15485 313 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 HIST2H2ACQ16777 129 aaPredicted RBP3.24□□□□□ -1.89
TRAV40-201ENST00000390467 CCDC96Q2M329 555 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 GPATCH4Q5T3I0 446 aaKnown RBP3.24□□□□□ -1.89
TRAV40-201ENST00000390467 FAM72AQ5TYM5 149 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 FAM72DQ6L9T8 149 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 LRRC8DQ7L1W4 858 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 FAM72BQ86X60 149 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 HMGCLL1Q8TB92 370 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 RHBDF1Q96CC6 855 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 CDCA5Q96FF9 252 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 ZSCAN31Q96LW9 406 aaPredicted RBP3.24□□□□□ -1.89
TRAV40-201ENST00000390467 KLHL15Q96M94 604 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 GPR63Q9BZJ6 419 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 GFRA4Q9GZZ7 299 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 NDST4Q9H3R1 872 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 HCN3Q9P1Z3 774 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 CNOT7Q9UIV1 285 aaKnown RBP3.24□□□□□ -1.89
TRAV40-201ENST00000390467 PADI3Q9ULW8 664 aa3.24□□□□□ -1.89
TRAV40-201ENST00000390467 GOLGA6L9A6NEM1 432 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 GAGE10A6NGK3 116 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 LILRA5A6NI73 299 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 NR1D1P20393 614 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 GNL1P36915 607 aaPredicted RBP3.23□□□□□ -1.89
TRAV40-201ENST00000390467 RAD23BP54727 409 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 PPFIA1Q13136 1202 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 ALG11Q2TAA5 492 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 SLC9B1Q4ZJI4 515 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 PLEKHA7Q6IQ23 1121 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 CPLX2Q6PUV4 134 aaKnown RBP3.23□□□□□ -1.89
TRAV40-201ENST00000390467 ZNF852Q6ZMS4 543 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 ASB18Q6ZVZ8 466 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 KCTD8Q6ZWB6 473 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 HAPLN4Q86UW8 402 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 RNF113BQ8IZP6 322 aaKnown RBP3.23□□□□□ -1.89
TRAV40-201ENST00000390467 PCDH20Q8N6Y1 951 aaKnown RBP3.23□□□□□ -1.89
TRAV40-201ENST00000390467 WDSUB1Q8N9V3 476 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 MAGEC3Q8TD91 643 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 GRAMD2BQ96HH9 432 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 SLC41A2Q96JW4 573 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 DUX3Q96PT4 197 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 MTERF1Q99551 399 aaKnown RBP3.23□□□□□ -1.89
TRAV40-201ENST00000390467 SEBOXQ9HB31 216 aaPredicted RBP3.23□□□□□ -1.89
TRAV40-201ENST00000390467 HCFC1R1Q9NWW0 138 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 DLGAP4Q9Y2H0 992 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 SCINQ9Y6U3 715 aa3.23□□□□□ -1.89
TRAV40-201ENST00000390467 SNAP23O00161 211 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 GUCY1B2O75343 617 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 HNRNPA1P09651 372 aaKnown RBP eCLIP3.22□□□□□ -1.89
TRAV40-201ENST00000390467 CNTFP26441 200 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 NR0B1P51843 470 aaKnown RBP3.22□□□□□ -1.89
TRAV40-201ENST00000390467 GALNT2Q10471 571 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 SREBF2Q12772 1141 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 NAE1Q13564 534 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 KRT24Q2M2I5 525 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 ARHGAP17Q68EM7 881 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 TRNP1Q6NT89 227 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 DUS1LQ6P1R4 473 aaKnown RBP3.22□□□□□ -1.89
TRAV40-201ENST00000390467 RAD9BQ6WBX8 426 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 PQLC2Q6ZP29 291 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 KRTAP7-1Q8IUC3 87 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 CTCFLQ8NI51 663 aaPredicted RBP3.22□□□□□ -1.89
TRAV40-201ENST00000390467 SH3GL2Q99962 352 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 FAM110AQ9BQ89 295 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 SYT17Q9BSW7 474 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 FUZQ9BT04 418 aa3.22□□□□□ -1.89
TRAV40-201ENST00000390467 A4GNTQ9UNA3 340 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms