RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 UBXN8O00124 270 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 SIX3O95343 332 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 TKTP29401 623 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 PIK3CGP48736 1102 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 PPP1R3AQ16821 1122 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 FBXL19Q6PCT2 694 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 DCP1BQ8IZD4 617 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 CENPSQ8N2Z9 138 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 TEKT5Q96M29 485 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 TBATAQ96M53 351 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 FCRL3Q96P31 734 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 TRIM39Q9HCM9 518 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 SCUBE2Q9NQ36 999 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 EHD3Q9NZN3 535 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.13□□□□□ -0.312e-6■■■■□ 20.5
TRAPPC9-201ENST00000389328 CDC14AQ9UNH5 594 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 DUSP12Q9UNI6 340 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 TCAF1Q9Y4C2 921 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 GPC6Q9Y625 555 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 MSI1O43347 362 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 IDH3BO43837 385 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 GLUD2P49448 558 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 POLR2JP52435 117 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 GALNT3Q14435 633 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF829Q3KNS6 432 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 RRM2BQ7LG56 351 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 FAM35AQ86V20 835 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 ARFGAP1Q8N6T3 406 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 NODALQ96S42 347 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 MROH8Q9H579 483 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 GPBP1L1Q9HC44 474 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 MKS1Q9NXB0 559 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 MAGEL2Q9UJ55 1249 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF214Q9UL59 606 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 MOXD2PA6NHM9 499 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 RSL1D1O76021 490 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 IL1BP01584 269 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 ABCB1P08183 1280 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 OXCT1P55809 520 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 TMEM110Q86TL2 294 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 AKAP14Q86UN6 197 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 PROSER1Q86XN7 944 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 DQX1Q8TE96 717 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 RAB2BQ8WUD1 216 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNHIT2Q9UHR6 403 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 PDE10AQ9Y233 779 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 GMEB1Q9Y692 573 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 PPEF2O14830 753 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 CD3EAPO15446 510 aaKnown RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 MLYCDO95822 493 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 ALOX5P09917 674 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 CYP2B6P20813 491 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF135P52742 658 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 CCDC142Q17RM4 750 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 TRIM69Q86WT6 500 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 CLHC1Q8NHS4 586 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 EXOC2Q96KP1 924 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 REEP1Q9H902 201 aa13.13□□□□□ -0.31
TRAPPC9-201ENST00000389328 PNMA8CA0A1B0GUJ8 204 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 DPYSL4O14531 572 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 ARPC2O15144 300 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 KRT6AP02538 564 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 KRT6BP04259 564 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 CDK4P11802 303 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 HALP42357 657 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 KRT6CP48668 564 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 TUBA4AP68366 448 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 FEM1AQ9BSK4 669 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 BCO2Q9BYV7 579 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 AKTIPQ9H8T0 292 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 BPIFA1Q9NP55 256 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 POLR3HQ9Y535 204 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 N4BP2Q86UW6 1770 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 A8MT66 165 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 LZTS3O60299 673 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 NTRK1P04629 796 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 TFAP2AP05549 437 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 HOXB8P17481 243 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 IL12AP29459 219 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 GJA8P48165 433 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 MTPNP58546 118 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 CDKL1Q00532 357 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 ERMP1Q7Z2K6 904 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 TMEM132CQ8N3T6 1108 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 LEMD2Q8NC56 503 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 PROX1Q92786 737 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 SLC47A1Q96FL8 570 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 POLR1EQ9GZS1 481 aaKnown RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 LAMB4A4D0S4 1761 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 SMIM28A0A1B0GU29 152 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 YJEFN3A6XGL0 299 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 FGF10O15520 208 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 ANGPTL1O95841 491 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 RECQLP46063 649 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 ZNF177Q13360 481 aaPredicted RBP13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 TTLL9Q3SXZ7 439 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 FOXB2Q5VYV0 432 aa13.12□□□□□ -0.31
TRAPPC9-201ENST00000389328 SLC2A6Q9UGQ3 507 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms