RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 LDB2O43679 373 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 ENTPD3O75355 529 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 PGM3O95394 542 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 PRF1P14222 555 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 NAGAP17050 411 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 ANXA7P20073 488 aaKnown RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 GNLYP22749 145 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 HOXC9P31274 260 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 METAP2P50579 478 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 STAT2P52630 851 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 MRPS5P82675 430 aaKnown RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 ADORA2A-AS1P86434 159 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 PPATQ06203 517 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 SRSF1Q07955 248 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 RABEP1Q15276 862 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 RASA2Q15283 850 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 C2orf68Q2NKX9 166 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 SOWAHCQ53LP3 525 aaPredicted RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 FSCBQ5H9T9 825 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 DNTTIP2Q5QJE6 756 aaKnown RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 PLEKHA7Q6IQ23 1121 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 DPPA4Q7L190 304 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 ARID3BQ8IVW6 561 aaPredicted RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 AVL9Q8NBF6 648 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 CCDC191Q8NCU4 936 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 INPP5DQ92835 1189 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 IGSF8Q969P0 613 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 RPL36ALQ969Q0 106 aaKnown RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 SH3GL2Q99962 352 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 KIFC3Q9BVG8 833 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 AP1M1Q9BXS5 423 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 ARHGEF38Q9NXL2 777 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 TAB2Q9NYJ8 693 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 NFKBIL1Q9UBC1 381 aaPredicted RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 SEC63Q9UGP8 760 aaKnown RBP5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 FRMD4BQ9Y2L6 1034 aa5.5□□□□□ -1.53
RNU6-40P-201ENST00000384254 RPS10-NUDT3A0A1W2PQS6 291 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 C1orf226A1L170 272 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 GLOD5A6NK44 160 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 SH2B2O14492 632 aaPredicted RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 MITFO75030 526 aaPredicted RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 IL11P20809 199 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 UBA1P22314 1058 aaKnown RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 RRM1P23921 792 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PIGAP37287 484 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 RPL3P39023 403 aaKnown RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 THPOP40225 353 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 MATR3P43243 847 aaKnown RBP eCLIP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PSMD6Q15008 389 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PNLIPRP3Q17RR3 467 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PMS2CLQ68D20 193 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 CFAP77Q6ZQR2 320 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 MTSS1LQ765P7 747 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 CTU1Q7Z7A3 348 aaKnown RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PIM3Q86V86 326 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 SRRM1Q8IYB3 904 aaKnown RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 SCML4Q8N228 414 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 SPATA6LQ8N4H0 392 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 OR8K5Q8NH50 307 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 SLC22A18Q96BI1 424 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 CNDP2Q96KP4 475 aaKnown RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 ACOX2Q99424 681 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 BAG1Q99933 345 aaPredicted RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 MRPL1Q9BYD6 325 aaKnown RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 FOXP1Q9H334 677 aaPredicted RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PPP1R3EQ9H7J1 279 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 MKKSQ9NPJ1 570 aaPredicted RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PSD3Q9NYI0 1048 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 MARCH4Q9P2E8 410 aaPredicted RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 COPG2Q9UBF2 871 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 BTBD3Q9Y2F9 522 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 PTRH2Q9Y3E5 179 aaKnown RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 MAGED1Q9Y5V3 778 aaPredicted RBP5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 FAM169AQ9Y6X4 670 aa5.49□□□□□ -1.53
RNU6-40P-201ENST00000384254 KANSL1LA0AUZ9 987 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 CGB1A6NKQ9 187 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 DKC1O60832 514 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 CSPG5O95196 566 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 APOA4P06727 396 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 ABCG1P45844 678 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 HSD17B4P51659 736 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 PSMC6P62333 389 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 KCNC3Q14003 757 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 MYBPC2Q14324 1141 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 ZNF284Q2VY69 593 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 LRIF1Q5T3J3 769 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 GARNL3Q5VVW2 1013 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 HIST2H2BCQ6DN03 193 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 HIST2H2BDQ6DRA6 164 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 COLCA1Q6ZS62 124 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 ZNF367Q7RTV3 350 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 ADGRA1Q86SQ6 560 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 SYT2Q8N9I0 419 aaPredicted RBP5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 HJURPQ8NCD3 748 aaPredicted RBP5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 ZNF548Q8NEK5 533 aaPredicted RBP5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 GAD1Q99259 594 aa5.48□□□□□ -1.53
RNU6-40P-201ENST00000384254 KXD1Q9BQD3 176 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms