RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 C19orf43Q9BQ61 176 aa11.91□□□□□ -0.5
PCNA-201ENST00000379143 CAPN10Q9HC96 672 aa11.91□□□□□ -0.5
PCNA-201ENST00000379143 FZD3Q9NPG1 666 aa11.91□□□□□ -0.5
PCNA-201ENST00000379143 NEU2Q9Y3R4 380 aa11.91□□□□□ -0.5
PCNA-201ENST00000379143 A0A1W2PR77 199 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 C2orf81A6NN90 581 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 CRTAMO95727 393 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 PIRTP0C851 137 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 TSHRP16473 764 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 GM2AP17900 193 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 TPSB2P20231 275 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 ETV3P41162 512 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 SPINT3P49223 89 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 CSNK1EP49674 416 aaKnown RBP11.9□□□□□ -0.5
PCNA-201ENST00000379143 MTM1Q13496 603 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 LAMB3Q13751 1172 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 PTK6Q13882 451 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 PUM1Q14671 1186 aaKnown RBP eCLIP11.9□□□□□ -0.56e-7■■■■□ 26.2
PCNA-201ENST00000379143 PTPRRQ15256 657 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 IRF4Q15306 451 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 TRIP13Q15645 432 aaPredicted RBP11.9□□□□□ -0.5
PCNA-201ENST00000379143 TPSAB1Q15661 275 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 WSCD2Q2TBF2 565 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 ZDHHC20Q5W0Z9 365 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 DENND5AQ6IQ26 1287 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 ESRP1Q6NXG1 681 aaKnown RBP11.9□□□□□ -0.5
PCNA-201ENST00000379143 PPP1R21Q6ZMI0 780 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 Q6ZVL8 140 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 MAATS1Q7Z4T9 603 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 TMC3Q7Z5M5 1100 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 TECPR1Q7Z6L1 1165 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 PCGF5Q86SE9 256 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 KLHL7Q8IXQ5 586 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 BRSK1Q8TDC3 778 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 SMIM14Q96QK8 99 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 MYOCQ99972 504 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 APOL2Q9BQE5 337 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 DLL3Q9NYJ7 618 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.9□□□□□ -0.5
PCNA-201ENST00000379143 SHOC2Q9UQ13 582 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 SLCO1B1Q9Y6L6 691 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 LRRK1Q38SD2 2015 aa11.9□□□□□ -0.5
PCNA-201ENST00000379143 POM121BA6NF01 834 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PATE3B3GLJ2 98 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 TLR4O00206 839 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 ARHGAP33O14559 1287 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 RAD51BO15315 384 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 DFNA5O60443 496 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 USP12O75317 370 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 KRT37O76014 449 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 C1SP09871 688 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 THEGLP0DJG4 465 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 TEAD1P28347 426 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 IGFALSP35858 605 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 ADCY8P40145 1251 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 MAGEA6P43360 314 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 VPS41P49754 854 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 ATXN3P54252 364 aaPredicted RBP11.89□□□□□ -0.51
PCNA-201ENST00000379143 CLDN2P57739 230 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 DCDC1P59894 354 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PFN3P60673 137 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PTK2BQ14289 1009 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 SPARCL1Q14515 664 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 TAF1AQ15573 450 aaPredicted RBP11.89□□□□□ -0.51
PCNA-201ENST00000379143 CCDC6Q16204 474 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PNCKQ6P2M8 343 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PRR23CQ6ZRP0 262 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PTAR1Q7Z6K3 402 aaPredicted RBP11.89□□□□□ -0.51
PCNA-201ENST00000379143 DCLK2Q8N568 766 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 OXR1Q8N573 874 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 MNS1Q8NEH6 495 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 AP2M1Q96CW1 435 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 BMFQ96LC9 184 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PLEKHG4BQ96PX9 1271 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 KRT12Q99456 494 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 FAM83DQ9H4H8 585 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 MBNL1Q9NR56 388 aaKnown RBP11.89□□□□□ -0.51
PCNA-201ENST00000379143 NFKBIL1Q9UBC1 381 aaPredicted RBP11.89□□□□□ -0.51
PCNA-201ENST00000379143 ASIC3Q9UHC3 531 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 ANKRD6Q9Y2G4 727 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 PKP3Q9Y446 797 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 SPO11Q9Y5K1 396 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 MRFAP1Q9Y605 127 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 RALGAPA1Q6GYQ0 2036 aa11.89□□□□□ -0.51
PCNA-201ENST00000379143 TPRP12270 2363 aaKnown RBP11.89□□□□□ -0.51
PCNA-201ENST00000379143 A0A0U1RQS6 177 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 A0A1B0GVT2 93 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 H0Y8X5 98 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 NDC80O14777 642 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 CER1O95813 267 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 SLC4A1P02730 911 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 WNT1P04628 370 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 PCCBP05166 539 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 HOXC4P09017 264 aaPredicted RBP11.88□□□□□ -0.51
PCNA-201ENST00000379143 ENGP17813 658 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 LPOP22079 712 aaPredicted RBP11.88□□□□□ -0.51
PCNA-201ENST00000379143 TGM1P22735 817 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 HTR1BP28222 390 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 TRIM23P36406 574 aa11.88□□□□□ -0.51
PCNA-201ENST00000379143 PTGIRP43119 386 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms