RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 GPATCH1Q9BRR8 931 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 GRIP2Q9C0E4 1043 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 UPF3AQ9H1J1 476 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 TUBB1Q9H4B7 451 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 MRPL40Q9NQ50 206 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 PLK2Q9NYY3 685 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 UBXN8O00124 270 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 CD3EAPO15446 510 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 SOAT2O75908 522 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 ASGR1P07306 291 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 FGF4P08620 206 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 CALRP27797 417 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 ATP4BP51164 291 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 NME5P56597 212 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 IL10RBQ08334 325 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 DSC1Q08554 894 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 GRB7Q14451 532 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 POLD3Q15054 466 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 SETMARQ53H47 684 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 SAMD4BQ5PRF9 694 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 AP1ARQ63HQ0 302 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 RYBPQ8N488 228 aaPredicted RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 ATAD1Q8NBU5 361 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 BLOC1S5Q8TDH9 187 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 BTN2A3PQ96KV6 586 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 C8orf48Q96LL4 319 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 NSMCE3Q96MG7 304 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 KCNA7Q96RP8 456 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 ATOH8Q96SQ7 321 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 MRPS26Q9BYN8 205 aaKnown RBP10.93□□□□□ -0.66
BEST1-201ENST00000378043 FBXO44Q9H4M3 255 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 VCX3AQ9NNX9 186 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 IL37Q9NZH6 218 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.93□□□□□ -0.66
BEST1-201ENST00000378043 MED16Q9Y2X0 877 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 SNX13Q9Y5W8 968 aa10.93□□□□□ -0.66
BEST1-201ENST00000378043 A0A0J9YYE9 177 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 DRGXA6NNA5 263 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 C9JVG2 144 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 H0YJX3 145 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 NME4O00746 187 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 RAMP2O60895 175 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 ADAMTS4O75173 837 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 GLP2RO95838 553 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 ATP6V1B2P21281 511 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 CLCN2P51788 898 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 HUNKP57058 714 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 TRIM32Q13049 653 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 GALNT3Q14435 633 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 PFKFB4Q16877 469 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 CLLU1OSQ5K130 101 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 KLHDC10Q6PID8 442 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 GPR150Q8NGU9 434 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 NOL11Q9H8H0 719 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 MID1IP1Q9NPA3 183 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 IKZF3Q9UKT9 509 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 ACTL7AQ9Y615 435 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 CROCCQ5TZA2 2017 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 ZFC3H1O60293 1989 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 FAM92AA1XBS5 289 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 FXYD1O00168 92 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 PIP5K1BO14986 540 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 SRP72O76094 671 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 HMBSP08397 361 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 CAPN3P20807 821 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 PBX3P40426 434 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 TXNL4AP83876 142 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 DYNC1I2Q13409 638 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 TRIM71Q2Q1W2 868 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 CARM1Q86X55 608 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 CANT1Q8WVQ1 401 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 FUBP3Q96I24 572 aaKnown RBP eCLIP10.92□□□□□ -0.66
BEST1-201ENST00000378043 SLC45A3Q96JT2 553 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 ZFRQ96KR1 1074 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 CIB1Q99828 191 aa10.92□□□□□ -0.66
BEST1-201ENST00000378043 TRMT13Q9NUP7 481 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.92□□□□□ -0.66
BEST1-201ENST00000378043 CNOT6Q9ULM6 557 aaKnown RBP10.92□□□□□ -0.66
BEST1-201ENST00000378043 ARHGEF37A1IGU5 675 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 TIPRLO75663 272 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 IGLV3-27P01718 113 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 CKMT2P17540 419 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 PSMC3P17980 439 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 OR1E1P30953 314 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 TRIP4Q15650 581 aaPredicted RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 VPS26BQ4G0F5 336 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 NADSYN1Q6IA69 706 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 DHFR2Q86XF0 187 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 RASAL3Q86YV0 1011 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 COLGALT2Q8IYK4 626 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 ATP6V0D2Q8N8Y2 350 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 GRIN3AQ8TCU5 1115 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 TWIST2Q8WVJ9 160 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 ROPN1LQ96C74 230 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 FEM1CQ96JP0 617 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 RPRD1AQ96P16 312 aaPredicted RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 POLR1EQ9GZS1 481 aaKnown RBP10.91□□□□□ -0.66
BEST1-201ENST00000378043 OCEL1Q9H607 264 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 PDFQ9HBH1 243 aa10.91□□□□□ -0.66
BEST1-201ENST00000378043 SLC52A3Q9NQ40 469 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms