RNA–Protein interactions for RNA: ENST00000377861.4

PCDH9-201, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 28,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-201ENST00000377861 GSTT2P0CG29 244 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 C5orf22Q49AR2 442 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF786Q8N393 782 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TBL1YQ9BQ87 522 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 FN3KQ9H479 309 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CAPN14A8MX76 684 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM32Q13049 653 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZDHHC24Q6UX98 284 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MANSC4A6NHS7 340 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZBTB48P10074 688 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 KRT33BQ14525 404 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MILR1Q7Z6M3 343 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 GPR22Q99680 433 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PAIP1Q9H074 479 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 INTS7Q9NVH2 962 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PCDHB5Q9Y5E4 795 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 DPP10Q8N608 796 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SPEF2Q9C093 1822 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 EIF1AYO14602 144 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 EIF1AXP47813 144 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 RORCP51449 518 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 POC5Q8NA72 575 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 NUAK2Q9H093 628 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ATP13A3Q9H7F0 1226 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MRTO4Q9UKD2 239 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 B3GAT3O94766 335 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MERTKQ12866 999 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CCDC103Q8IW40 242 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM209Q96SK2 561 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 FARP2O94887 1054 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MYLPFQ96A32 169 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 MIPEPQ99797 713 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 RPL36Q9Y3U8 105 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TOR1BO14657 336 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SCGNO76038 276 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PGK2P07205 417 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 YWHAQP27348 245 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TPP2P29144 1249 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 TRIM71Q2Q1W2 868 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 VRK1Q99986 396 aaPredicted RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 RNH1P13489 461 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 DNAJA1P31689 397 aaKnown RBP4.94□□□□□ -1.62
PCDH9-201ENST00000377861 NFYCQ13952 458 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 VPS26BQ4G0F5 336 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SH3KBP1Q96B97 665 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 NLNQ9BYT8 704 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 SDCBP2Q9H190 292 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 LATS2Q9NRM7 1088 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ASB4Q9Y574 426 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 C22orf31O95567 290 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 NDST3O95803 873 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 PTTG1O95997 202 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ZSWIM9Q86XI8 627 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 EID2Q8N6I1 236 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 EMC1Q8N766 993 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 KLK4Q9Y5K2 254 aa4.94□□□□□ -1.62
PCDH9-201ENST00000377861 ANKDD1BA6NHY2 528 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 DHX15O43143 795 aaKnown RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 TMEM26Q6ZUK4 368 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 GPRIN3Q6ZVF9 776 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 TAGAPQ8N103 731 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 OAS1P00973 400 aaKnown RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 JCHAINP01591 159 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 ERVK-8P63133 956 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 TARBP2Q15633 366 aaKnown RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 C4orf33Q8N1A6 199 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 F5H5T6 163 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 HLA-DPB1P04440 258 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 TCF4P15884 667 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 FGFR3P22607 806 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 RPL19P84098 196 aaKnown RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 TRIP4Q15650 581 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 ADGRF2Q8IZF7 708 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 SETD7Q8WTS6 366 aaKnown RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 C3orf14Q9HBI5 128 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 CA12O43570 354 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 CLPXO76031 633 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 NR2C1P13056 603 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 GJC1P36383 396 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 GPR50Q13585 617 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 RNF225M0QZC1 329 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 HPCAL1P37235 193 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 SCUBE3Q8IX30 993 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 PRDM9Q9NQV7 894 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 GPN3Q9UHW5 284 aaPredicted RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 URODP06132 367 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 ARHGEF7Q14155 803 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 PDE12Q6L8Q7 609 aaKnown RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 SMG8Q8ND04 991 aaKnown RBP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 FAM162AQ96A26 154 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 ZYG11BQ9C0D3 744 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 NLGN3Q9NZ94 848 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 C16orf72Q14CZ0 275 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 ZNF618Q5T7W0 954 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 GLOD4Q9HC38 313 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 RBM22Q9NW64 420 aaKnown RBP eCLIP4.93□□□□□ -1.62
PCDH9-201ENST00000377861 PCDHGB2Q9Y5G2 931 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 RASAL1O95294 804 aa4.93□□□□□ -1.62
PCDH9-201ENST00000377861 LEPRP48357 1165 aaKnown RBP4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms