RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 PCDH19Q8TAB3 1148 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 PIWIL2Q8TC59 973 aaKnown RBP15.54■□□□□ 0.08
FXN-201ENST00000377270 LRRN4Q8WUT4 740 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 ZFYVE19Q96K21 471 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 SNX18Q96RF0 628 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 SLC13A1Q9BZW2 595 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 COPS7BQ9H9Q2 264 aaPredicted RBP15.54■□□□□ 0.08
FXN-201ENST00000377270 GJD2Q9UKL4 321 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 TESMINQ9Y4I5 508 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 NRCAMQ92823 1304 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 LOC100653049A0A140TA62 436 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 ARHGEF37A1IGU5 675 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 PDPK1O15530 556 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 AVILO75366 819 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 KRT34O76011 436 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 KRT37O76014 449 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 RETP07949 1114 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 DARSP14868 501 aaKnown RBP15.54■□□□□ 0.08
FXN-201ENST00000377270 RBL1P28749 1068 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 CLCNKBP51801 687 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 SNX16P57768 344 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 CDC42EP1Q00587 391 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 PPP1R3AQ16821 1122 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 FAM209BQ5JX69 171 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 ALKAL1Q6UXT8 129 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 ARCQ7LC44 396 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 UNC93AQ86WB7 457 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 SIX6OS1Q8N1H7 587 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 FIBCD1Q8N539 461 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 CLEC4CQ8WTT0 213 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 SH3YL1Q96HL8 342 aaPredicted RBP15.54■□□□□ 0.08
FXN-201ENST00000377270 RHOBTB2Q9BYZ6 727 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 PNPLA3Q9NST1 481 aa15.54■□□□□ 0.08
FXN-201ENST00000377270 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP15.53■□□□□ 0.08
FXN-201ENST00000377270 A0A087WXM4 84 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 TXNL4AP83876 142 aaKnown RBP15.53■□□□□ 0.08
FXN-201ENST00000377270 PMS2P3Q13401 168 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 PEX6Q13608 980 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 DLG2Q15700 870 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 ATG14Q6ZNE5 492 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 ZCCHC23Q6ZST2 131 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 BEND5Q7L4P6 421 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 DNAJB3Q8WWF6 145 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 IL12RB2Q99665 862 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 CHID1Q9BWS9 393 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 ABCG4Q9H172 646 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 ERVMER34-1Q9H9K5 563 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 TNFRSF10DQ9UBN6 386 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 ENOPH1Q9UHY7 261 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 ACAD8Q9UKU7 415 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 MUSKO15146 869 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 TOMM70O94826 608 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 CAPNS1P04632 268 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 LCP1P13796 627 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 TGM2P21980 687 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 LMO2P25791 158 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 MRPS22P82650 360 aaKnown RBP15.53■□□□□ 0.08
FXN-201ENST00000377270 OCA2Q04671 838 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 KCNJ11Q14654 390 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 FBXO47Q5MNV8 452 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 LILRA2Q8N149 483 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 PTPN18Q99952 460 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 NPLQ9BXD5 320 aaPredicted RBP15.53■□□□□ 0.08
FXN-201ENST00000377270 RAD21L1Q9H4I0 556 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 MCCC2Q9HCC0 563 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 WDR70Q9NW82 654 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 PAK5Q9P286 719 aa15.53■□□□□ 0.08
FXN-201ENST00000377270 UBQLN1Q9UMX0 589 aaKnown RBP15.53■□□□□ 0.08
FXN-201ENST00000377270 PIN4Q9Y237 131 aaKnown RBP15.53■□□□□ 0.08
FXN-201ENST00000377270 SMIM35A0A1B0GVV1 85 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 KBTBD13C9JR72 458 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 NOL3O60936 208 aaKnown RBP15.52■□□□□ 0.08
FXN-201ENST00000377270 SPAG6O75602 509 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 CCNKO75909 580 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 CCNA2P20248 432 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 HTR2BP41595 481 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 ATXN1P54253 815 aaKnown RBP15.52■□□□□ 0.08
FXN-201ENST00000377270 FAXCQ5TGI0 409 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 ARHGAP17Q68EM7 881 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 LRRTM3Q86VH5 581 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 ZDHHC17Q8IUH5 632 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 ZNF778Q96MU6 729 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 PARK7Q99497 189 aaKnown RBP15.52■□□□□ 0.08
FXN-201ENST00000377270 MRPL40Q9NQ50 206 aaKnown RBP15.52■□□□□ 0.08
FXN-201ENST00000377270 TOR4AQ9NXH8 423 aa15.52■□□□□ 0.08
FXN-201ENST00000377270 SMIM28A0A1B0GU29 152 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 KPNA7A9QM74 516 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 BET1O15155 118 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 RFPL2O75678 378 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 KCNH1O95259 989 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 F2P00734 622 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 MYL4P12829 197 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 ARHGDIBP52566 201 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 RAD51Q06609 339 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 RAB39AQ14964 217 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 MAPK11Q15759 364 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 FAM110CQ1W6H9 321 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 C5orf22Q49AR2 442 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 PDPK2PQ6A1A2 396 aa15.52■□□□□ 0.07
FXN-201ENST00000377270 SLC9A4Q6AI14 798 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms