RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 DSC3Q14574 896 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 ADRM1Q16186 407 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 MYO1HQ8N1T3 1032 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 PCDHB8Q9UN66 801 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 PTGDR2Q9Y5Y4 395 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 TTC3P53804 2025 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 BBIP1A8MTZ0 92 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 PPP6CO00743 305 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 TIPRLO75663 272 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 GJB3O75712 270 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 CDK14O94921 469 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 SIX3O95343 332 aaPredicted RBP25.29■■□□□ 1.64
C9orf40-201ENST00000376854 GRIA3P42263 894 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 EFEMP1Q12805 493 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 LPIN1Q14693 890 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 RAB44Q7Z6P3 723 aaPredicted RBP25.29■■□□□ 1.64
C9orf40-201ENST00000376854 CARM1Q86X55 608 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 NUP93Q8N1F7 819 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 TSPAN14Q8NG11 270 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 OR2T34Q8NGX1 318 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 OR2T3Q8NH03 318 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 IL1RL2Q9HB29 575 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 MID1IP1Q9NPA3 183 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.29■■□□□ 1.64
C9orf40-201ENST00000376854 ARL5AQ9Y689 179 aa25.29■■□□□ 1.64
C9orf40-201ENST00000376854 ARHGAP10A1A4S6 786 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 ASLP04424 464 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 TIAL1Q01085 375 aaKnown RBP eCLIP25.28■■□□□ 1.64
C9orf40-201ENST00000376854 LAMB3Q13751 1172 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 PTPRCAPQ14761 206 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 BLOC1S5Q8TDH9 187 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 IGSF8Q969P0 613 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 LRCH3Q96II8 777 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 DNAJC1Q96KC8 554 aaKnown RBP25.28■■□□□ 1.64
C9orf40-201ENST00000376854 ASB2Q96Q27 587 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 TMEM79Q9BSE2 394 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 GMIPQ9P107 970 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 GIMAP2Q9UG22 337 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 UBXN8O00124 270 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 PIP5K1BO14986 540 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 CD3EAPO15446 510 aaKnown RBP25.28■■□□□ 1.64
C9orf40-201ENST00000376854 B4GALT3O60512 393 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 FGF4P08620 206 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 OR4D1Q15615 310 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 IL31Q6EBC2 164 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 FBXL22Q6P050 247 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 TWIST2Q8WVJ9 160 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 CANT1Q8WVQ1 401 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 HAUS8Q9BT25 410 aa25.28■■□□□ 1.64
C9orf40-201ENST00000376854 LRRC14BA6NHZ5 514 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 ASGR1P07306 291 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 ATP6V1B2P21281 511 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 ACVR1Q04771 509 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 TNK2Q07912 1038 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 PFKFB4Q16877 469 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 RAP1GAP2Q684P5 730 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 MRNIPQ6NTE8 343 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 BORAQ6PGQ7 559 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 ZBTB49Q6ZSB9 765 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 ATP6V0D2Q8N8Y2 350 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 SEMA3CQ99985 751 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 GPATCH1Q9BRR8 931 aaKnown RBP25.27■■□□□ 1.64
C9orf40-201ENST00000376854 MAP10Q9P2G4 905 aa25.27■■□□□ 1.64
C9orf40-201ENST00000376854 TDRD15B5MCY1 1934 aaKnown RBP25.27■■□□□ 1.64
C9orf40-201ENST00000376854 IGLV3-10A0A075B6K4 115 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 AZIN1O14977 448 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 AKAP10O43572 662 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 ZNF37AP17032 561 aaPredicted RBP25.26■■□□□ 1.63
C9orf40-201ENST00000376854 FOXA1P55317 472 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 SEMA3AQ14563 771 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 POLD3Q15054 466 aaPredicted RBP25.26■■□□□ 1.63
C9orf40-201ENST00000376854 VPS26BQ4G0F5 336 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 ARHGAP22Q7Z5H3 698 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 ANKFN1Q8N957 763 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 CCT7Q99832 543 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 FBXO44Q9H4M3 255 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 OCEL1Q9H607 264 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 ZFYVE28Q9HCC9 887 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 ARMC1Q9NVT9 282 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 CCDC162PA2VCL2 907 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 RAMP2O60895 175 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 H6PDO95479 791 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 CKMT2P17540 419 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 GRB7Q14451 532 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 IRAK1BP1Q5VVH5 260 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 KRT80Q6KB66 452 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 CIR1Q86X95 450 aaPredicted RBP25.26■■□□□ 1.63
C9orf40-201ENST00000376854 DDIASQ8IXT1 998 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 MIER2Q8N344 545 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 NSUN5Q96P11 429 aaKnown RBP25.26■■□□□ 1.63
C9orf40-201ENST00000376854 HOPXQ9BPY8 73 aaPredicted RBP25.26■■□□□ 1.63
C9orf40-201ENST00000376854 NDUFAF1Q9Y375 327 aa25.26■■□□□ 1.63
C9orf40-201ENST00000376854 NME4O00746 187 aa25.25■■□□□ 1.63
C9orf40-201ENST00000376854 HTRA2O43464 458 aaPredicted RBP25.25■■□□□ 1.63
C9orf40-201ENST00000376854 TBX18O95935 607 aa25.25■■□□□ 1.63
C9orf40-201ENST00000376854 MTHFD2P13995 350 aa25.25■■□□□ 1.63
C9orf40-201ENST00000376854 HOXB8P17481 243 aaPredicted RBP25.25■■□□□ 1.63
C9orf40-201ENST00000376854 GRK4P32298 578 aa25.25■■□□□ 1.63
C9orf40-201ENST00000376854 IL10RBQ08334 325 aa25.25■■□□□ 1.63
C9orf40-201ENST00000376854 GPR150Q8NGU9 434 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms