RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 OAZ3Q9UMX2 235 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 RUVBL2Q9Y230 463 aaKnown RBP12.94□□□□□ -0.34
MSH5-204ENST00000375755 SLC27A5Q9Y2P5 690 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 ST14Q9Y5Y6 855 aa12.94□□□□□ -0.34
MSH5-204ENST00000375755 SRP72O76094 671 aaKnown RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 DDHD2O94830 711 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 USP17L7P0C7H9 530 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 RCVRNP35243 200 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 RPL34P49207 117 aaKnown RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 TKTL1P51854 596 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 NKX3-2P78367 333 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 ATP6AP1Q15904 470 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 PPP1R3AQ16821 1122 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 PERM1Q5SV97 790 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 FAM219BQ5XKK7 198 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 ZNF280BQ86YH2 543 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 TP53INP2Q8IXH6 220 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 RAVER1Q8IY67 606 aaKnown RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 COLGALT2Q8IYK4 626 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 FSTL5Q8N475 847 aaPredicted RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 SPPL2BQ8TCT7 592 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 RAET1EQ8TD07 263 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 HPS1Q92902 700 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 P2RY11Q96G91 374 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 FAM124BQ9H5Z6 455 aaPredicted RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 LRRC40Q9H9A6 602 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 FANCEQ9HB96 536 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 CHST12Q9NRB3 414 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 VPS51Q9UID3 782 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 TET1Q8NFU7 2136 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 YJEFN3A6XGL0 299 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 ZNF487B1APH4 448 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 TARM1B6A8C7 271 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 ACOX3O15254 700 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 B4GAT1O43505 415 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 FYNP06241 537 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 CKBP12277 381 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 GOT1P17174 413 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 SULT1E1P49888 294 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 TMBIM6P55061 237 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 PLCL1Q15111 1095 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 PHKG1Q16816 387 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 TSTD2Q5T7W7 516 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 NEPROQ6NW34 567 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 C8orf82Q6P1X6 216 aaPredicted RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 CNSTQ6PJW8 725 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 MRPL10Q7Z7H8 261 aaKnown RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 LRRTM3Q86VH5 581 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 CMTR2Q8IYT2 770 aaKnown RBP12.93□□□□□ -0.34
MSH5-204ENST00000375755 BPIFB6Q8NFQ5 453 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 OR9I1Q8NGQ6 314 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 LINC01599Q8WXQ3 324 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 SNX19Q92543 992 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 GLT1D1Q96MS3 346 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 OMDQ99983 421 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 ULBP1Q9BZM6 244 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 DNAI2Q9GZS0 605 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 GBA3Q9H227 469 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 TLK1Q9UKI8 766 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 AP4E1Q9UPM8 1137 aa12.93□□□□□ -0.34
MSH5-204ENST00000375755 A0A0U1RQF3 1178 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 TRPC5OSA6NMA1 111 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 I6L893 689 aaPredicted RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 EI24O14681 340 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 TIMM44O43615 452 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 MFSD11O43934 449 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 CPNE6O95741 557 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 PTPN9P43378 593 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 CSRP3P50461 194 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 PRKAA2P54646 552 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 TRAF7Q6Q0C0 670 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SPPL2CQ8IUH8 684 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SPATA6LQ8N4H0 392 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 CENPIQ92674 756 aaPredicted RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 CNDP2Q96KP4 475 aaKnown RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 TUBA1CQ9BQE3 449 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 MCMBPQ9BTE3 642 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 HERC2P3Q9BVR0 1158 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 TPK1Q9H3S4 243 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 IARS2Q9NSE4 1012 aaKnown RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.92□□□□□ -0.34
MSH5-204ENST00000375755 GTSE1Q9NYZ3 720 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 IFT80Q9P2H3 777 aaPredicted RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 XPR1Q9UBH6 696 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SEPT3Q9UH03 358 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 DHRS12A0PJE2 317 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SNRPB2P08579 225 aaKnown RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 OR4Q2P0C623 313 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 HSPA8P11142 646 aaKnown RBP12.92□□□□□ -0.34
MSH5-204ENST00000375755 HNRNPLP14866 589 aaKnown RBP eCLIP12.92□□□□□ -0.348e-8■■■□□ 16.1
MSH5-204ENST00000375755 CAPGP40121 348 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 HLCSP50747 726 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SQLEQ14534 574 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 MAPRE2Q15555 327 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 CYBRD1Q53TN4 286 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 LHX8Q68G74 356 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 TMEM135Q86UB9 458 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 FAM35AQ86V20 835 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 SNX29P2Q8IUI4 249 aa12.92□□□□□ -0.34
MSH5-204ENST00000375755 CENPLQ8N0S6 344 aaPredicted RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms