RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ECT2LQ008S8 904 aa23.8■■□□□ 1.4
CDK9-201ENST00000373264 MED21Q13503 144 aa23.8■■□□□ 1.4
CDK9-201ENST00000373264 LRP8Q14114 963 aa23.8■■□□□ 1.4
CDK9-201ENST00000373264 OR4K2Q8NGD2 314 aa23.8■■□□□ 1.4
CDK9-201ENST00000373264 BRSK1Q8TDC3 778 aa23.8■■□□□ 1.4
CDK9-201ENST00000373264 VPS28Q9UK41 221 aa23.8■■□□□ 1.4
CDK9-201ENST00000373264 PCDHGC4Q9Y5F7 938 aa23.8■■□□□ 1.4
CDK9-201ENST00000373264 H3BNC9 293 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 FGF1P05230 155 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 SERPINF2P08697 491 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 PMLP29590 882 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 GRIA2P42262 883 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 HERVK_113P63132 956 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 SATB1Q01826 763 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 PAQR3Q6TCH7 311 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 LARP4Q71RC2 724 aaKnown RBP eCLIP23.79■■□□□ 1.4
CDK9-201ENST00000373264 C16orf59Q7L2K0 433 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 SLC22A9Q8IVM8 553 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 ATP6V1E2Q96A05 226 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 RMDN1Q96DB5 314 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 SLC30A3Q99726 388 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 ERVK-6Q9BXR3 956 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 MID1IP1Q9NPA3 183 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 TBC1D4O60343 1298 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 RNASEH2AO75792 299 aaKnown RBP23.79■■□□□ 1.4
CDK9-201ENST00000373264 BCAS2O75934 225 aaPredicted RBP23.79■■□□□ 1.4
CDK9-201ENST00000373264 HLA-DPA1P20036 260 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 MAPKAPK2P49137 400 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 YBEYP58557 167 aaPredicted RBP23.79■■□□□ 1.4
CDK9-201ENST00000373264 SP3Q02447 781 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 GALNT7Q86SF2 657 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 FUNDC1Q8IVP5 155 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 FAM110BQ8TC76 370 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 CD99L2Q8TCZ2 262 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 L3HYPDHQ96EM0 354 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 C19orf60Q96EN9 201 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 NACA2Q9H009 215 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 AKTIPQ9H8T0 292 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 BTRCQ9Y297 605 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 CHD5Q8TDI0 1954 aa23.79■■□□□ 1.4
CDK9-201ENST00000373264 PRORSD1PA6NEY8 169 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 IRF1P10914 325 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 STC1P52823 247 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 RING1Q06587 406 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 GRB7Q14451 532 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 SQLEQ14534 574 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 THEMIS2Q5TEJ8 643 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 IL23RQ5VWK5 629 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 LINGO4Q6UY18 593 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 CYP2R1Q6VVX0 501 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 TRPC4APQ8TEL6 797 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 ZNF512Q96ME7 567 aaPredicted RBP23.78■■□□□ 1.4
CDK9-201ENST00000373264 IL1RL2Q9HB29 575 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 BPIFA1Q9NP55 256 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 NCF1BA6NI72 391 aaPredicted RBP23.78■■□□□ 1.4
CDK9-201ENST00000373264 NCF1CA8MVU1 366 aaPredicted RBP23.78■■□□□ 1.4
CDK9-201ENST00000373264 ACSL4O60488 711 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 PRLP01236 227 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 NCF1P14598 390 aaPredicted RBP23.78■■□□□ 1.4
CDK9-201ENST00000373264 ADGRE1Q14246 886 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 GEN1Q17RS7 908 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 MRNIPQ6NTE8 343 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 GALNT4Q8N4A0 578 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 STON2Q8WXE9 905 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 ESAMQ96AP7 390 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 TRIM8Q9BZR9 551 aa23.78■■□□□ 1.4
CDK9-201ENST00000373264 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.78■■□□□ 1.4
CDK9-201ENST00000373264 OR1I1O60431 355 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 GALTP07902 379 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 INHBCP55103 352 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 RFTN1Q14699 578 aaPredicted RBP23.77■■□□□ 1.4
CDK9-201ENST00000373264 PDK3Q15120 406 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 LHX8Q68G74 356 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 ICA1LQ8NDH6 482 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 GABPB2Q8TAK5 448 aaPredicted RBP23.77■■□□□ 1.4
CDK9-201ENST00000373264 SPATA17Q96L03 361 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 AARSD1Q9BTE6 412 aaKnown RBP23.77■■□□□ 1.4
CDK9-201ENST00000373264 SEMA6AQ9H2E6 1030 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 TUBB1Q9H4B7 451 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 MYOCOSA0A1B0GUC4 107 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 CBX4O00257 560 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 PIP5K1BO14986 540 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 NDST3O95803 873 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 MYCP01106 439 aaPredicted RBP23.77■■□□□ 1.4
CDK9-201ENST00000373264 NAIF1Q69YI7 327 aaPredicted RBP23.77■■□□□ 1.4
CDK9-201ENST00000373264 RETREG3Q86VR2 466 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 PIANPQ8IYJ0 282 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 LRGUKQ96M69 825 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 ATOH8Q96SQ7 321 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 MGME1Q9BQP7 344 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 UBAP1Q9NZ09 502 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 C6orf203Q9P0P8 240 aaPredicted RBP23.77■■□□□ 1.4
CDK9-201ENST00000373264 CASP8AP2Q9UKL3 1982 aa23.77■■□□□ 1.4
CDK9-201ENST00000373264 TBKBP1A7MCY6 615 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 CDC7O00311 574 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 CSPG5O95196 566 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 ZNF140P52738 457 aaPredicted RBP23.76■■□□□ 1.39
CDK9-201ENST00000373264 FAR2Q96K12 515 aa23.76■■□□□ 1.39
CDK9-201ENST00000373264 CINPQ9BW66 212 aaPredicted RBP23.76■■□□□ 1.39
CDK9-201ENST00000373264 VCX3BQ9H321 246 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms