RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 SCUBE3Q8IX30 993 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 EFCAB3Q8N7B9 438 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 LEMD2Q8NC56 503 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RCN3Q96D15 328 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TRMT2BQ96GJ1 504 aaKnown RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 MAELQ96JY0 434 aaKnown RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 DNAJC1Q96KC8 554 aaKnown RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 HSFY1Q96LI6 401 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TSNARE1Q96NA8 513 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 MCMBPQ9BTE3 642 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TTLL2Q9BWV7 592 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 ANKRD60Q9BZ19 345 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 OSBPL6Q9BZF3 934 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RAB6CQ9H0N0 254 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 DHX35Q9H5Z1 703 aaKnown RBP11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 SYBUQ9NX95 663 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 TRPM5Q9NZQ8 1165 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 BFARQ9NZS9 450 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 GMIPQ9P107 970 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 AP4S1Q9Y587 144 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PSAT1Q9Y617 370 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 RPS6KL1Q9Y6S9 549 aa11.49□□□□□ -0.57
TSPAN1-201ENST00000372003 PRUNE2Q8WUY3 3088 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 H3BSA7 217 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 GRID2O43424 1007 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 NPHS1O60500 1241 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 CBFA2T3O75081 653 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 MOSPD3O75425 235 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 FGF19O95750 216 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 C2P06681 752 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 TFEBP19484 476 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 SLC7A1P30825 629 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 ACADSBP45954 432 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 NPY2RP49146 381 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 PGFP49763 221 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 SESN2P58004 480 aaPredicted RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 STX5Q13190 355 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 PDAP1Q13442 181 aaKnown RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 PEX6Q13608 980 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 TRIM25Q14258 630 aaKnown RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 SMAD2Q15796 467 aaKnown RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 ANO4Q32M45 955 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 PUS10Q3MIT2 529 aaKnown RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 GPR158Q5T848 1215 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 TXNDC8Q6A555 127 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 FSTL4Q6MZW2 842 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 HACD2Q6Y1H2 254 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 LPCAT2Q7L5N7 544 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 STRA8Q7Z7C7 330 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 PLD6Q8N2A8 252 aaKnown RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 CLEC4CQ8WTT0 213 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 MRPS31Q92665 395 aaKnown RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 FGF13Q92913 245 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 EME1Q96AY2 570 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 VPS50Q96JG6 964 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 FAR2Q96K12 515 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 KCTD15Q96SI1 283 aaPredicted RBP11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 TRPC7Q9HCX4 862 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 COMMD8Q9NX08 183 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 IL37Q9NZH6 218 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 CDH7Q9ULB5 785 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 SCML2Q9UQR0 700 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 FAM50BQ9Y247 325 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 SH3GLB1Q9Y371 365 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 RNF11Q9Y3C5 154 aa11.48□□□□□ -0.57
TSPAN1-201ENST00000372003 COL6A3P12111 3177 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 A0A087WXM4 84 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 A0A1W2PQH9 124 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 TCRBV3S1A0A5B6 114 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ZNF840PA6NDX5 716 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 TTC36A6NLP5 189 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 RNF103O00237 685 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 PAPSS1O43252 624 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 RNASEH2AO75792 299 aaKnown RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ERVK-10P10266 1014 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 C7P10643 843 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ENO3P13929 434 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 PCSK6P29122 969 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ESRRGP62508 458 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 COG7P83436 770 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 PTK2BQ14289 1009 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 PPP2R5DQ14738 602 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 PAFAH1B3Q15102 231 aaKnown RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ARHGAP15Q53QZ3 475 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ANKFN1Q8N957 763 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 SMYD1Q8NB12 490 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 GOLM1Q8NBJ4 401 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 TNIP2Q8NFZ5 429 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ZNF420Q8TAQ5 688 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 RMND5BQ96G75 393 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 PIWIL1Q96J94 861 aaKnown RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ZSWIM3Q96MP5 696 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 KLHL32Q96NJ5 620 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 MYADMQ96S97 322 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 CYP2S1Q96SQ9 504 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 PHF7Q9BWX1 381 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 ACE2Q9BYF1 805 aaPredicted RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 CLK4Q9HAZ1 481 aaKnown RBP11.47□□□□□ -0.57
TSPAN1-201ENST00000372003 CASS4Q9NQ75 786 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms