RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 DPEP2Q9H4A9 486 aa16.13■□□□□ 0.17
VMA21-202ENST00000370361 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.13■□□□□ 0.17
VMA21-202ENST00000370361 SLC17A4Q9Y2C5 497 aa16.13■□□□□ 0.17
VMA21-202ENST00000370361 SMG1Q96Q15 3661 aaKnown RBP16.12■□□□□ 0.17
VMA21-202ENST00000370361 A0A1W2PNU3 283 aaPredicted RBP16.12■□□□□ 0.17
VMA21-202ENST00000370361 ZNF487B1APH4 448 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 MATN3O15232 486 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 H2AFZP0C0S5 128 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 TCF4P15884 667 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 MAN1A1P33908 653 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 SSR1P43307 286 aaKnown RBP16.12■□□□□ 0.17
VMA21-202ENST00000370361 GPR3P46089 330 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 CCL7P80098 99 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 ZFP36L1Q07352 338 aaKnown RBP16.12■□□□□ 0.17
VMA21-202ENST00000370361 TRAF2Q12933 501 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 NR1D2Q14995 579 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 RAET1GQ6H3X3 334 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 ADAMTSL4Q6UY14 1074 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 H2AFVQ71UI9 128 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 SPRED1Q7Z699 444 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 C17orf82Q86X59 251 aaPredicted RBP16.12■□□□□ 0.17
VMA21-202ENST00000370361 VSIG1Q86XK7 387 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 TP53INP2Q8IXH6 220 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 NRSN1Q8IZ57 195 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 KCTD6Q8NC69 237 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 NAF1Q96HR8 494 aaKnown RBP16.12■□□□□ 0.17
VMA21-202ENST00000370361 CMKLR1Q99788 373 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 LGR4Q9BXB1 951 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 CARS2Q9HA77 564 aaKnown RBP16.12■□□□□ 0.17
VMA21-202ENST00000370361 EPB41L5Q9HCM4 733 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 NT5MQ9NPB1 228 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 IFNKQ9P0W0 207 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 LRIT1Q9P2V4 623 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 RABGEF1Q9UJ41 708 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 MOSPD1Q9UJG1 213 aa16.12■□□□□ 0.17
VMA21-202ENST00000370361 A0A1W2PQM1 296 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 NPIPB15A6NHN6 443 aaPredicted RBP16.11■□□□□ 0.17
VMA21-202ENST00000370361 B4DGG1 531 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 NVLO15381 856 aaKnown RBP16.11■□□□□ 0.17
VMA21-202ENST00000370361 FZD6O60353 706 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 PROSCO94903 275 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 GYPCP04921 128 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 CEACAM5P06731 702 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 JMJD7P0C870 316 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 LHCGRP22888 699 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 IL4RP24394 825 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 CD82P27701 267 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 ETV3P41162 512 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 ARSEP51690 589 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 EPHB1P54762 984 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 LRP8Q14114 963 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 DPYSL3Q14195 570 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 SLC18A3Q16572 532 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 TXNRD3NBQ6F5E7 133 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 ZNF438Q7Z4V0 828 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 PIH1D2Q8WWB5 315 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 FAF2Q96CS3 445 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 SCARF2Q96GP6 870 aaPredicted RBP16.11■□□□□ 0.17
VMA21-202ENST00000370361 NSMCE3Q96MG7 304 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 ZNF830Q96NB3 372 aaPredicted RBP16.11■□□□□ 0.17
VMA21-202ENST00000370361 SEMA3CQ99985 751 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 TSPY26PQ9H489 355 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 MRPL40Q9NQ50 206 aaKnown RBP16.11■□□□□ 0.17
VMA21-202ENST00000370361 CTTNBP2NLQ9P2B4 639 aa16.11■□□□□ 0.17
VMA21-202ENST00000370361 ATXN7L1Q9ULK2 861 aaPredicted RBP16.11■□□□□ 0.17
VMA21-202ENST00000370361 A0A0J9YYE9 177 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 SSU72P8A0A1W2PR75 194 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 RHPN2P1A8MT19 583 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 A8MX80 341 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 K7ENP7 123 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 MFSD11O43934 449 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 CPNE6O95741 557 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 TRBC1P01850 177 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 UGT1A5P35504 534 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 GPR1P46091 355 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 MAXP61244 160 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 ITKQ08881 620 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 BIRC2Q13490 618 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 TAF1BQ53T94 588 aaPredicted RBP16.1■□□□□ 0.17
VMA21-202ENST00000370361 ANKRD20A8PQ5CZ79 823 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 NCBP2-AS2Q69YL0 99 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 INO80CQ6PI98 192 aaPredicted RBP16.1■□□□□ 0.17
VMA21-202ENST00000370361 FOXR1Q6PIV2 292 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 XKR5Q6UX68 686 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 Q6ZVL8 140 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 HSD11B1LQ7Z5J1 315 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 TECPR1Q7Z6L1 1165 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 ZDHHC1Q8WTX9 485 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 HDAC11Q96DB2 347 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 BTBD6Q96KE9 485 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 LYSMD1Q96S90 227 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 ZNHIT6Q9NWK9 470 aaKnown RBP16.1■□□□□ 0.17
VMA21-202ENST00000370361 SEPT10Q9P0V9 454 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 NENFQ9UMX5 172 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 RNF215Q9Y6U7 377 aa16.1■□□□□ 0.17
VMA21-202ENST00000370361 UNC13CQ8NB66 2214 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 RGSL1A5PLK6 1076 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 GOLGA6CA6NDK9 693 aa16.09■□□□□ 0.17
VMA21-202ENST00000370361 GOLGA6BA6NDN3 693 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms