RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TPK1Q9H3S4 243 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 ATXN10Q9UBB4 475 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 OAS3Q9Y6K5 1087 aaKnown RBP12.46□□□□□ -0.41
HCFC1-202ENST00000369984 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 BAZ2AQ9UIF9 1905 aaKnown RBP12.46□□□□□ -0.41
HCFC1-202ENST00000369984 TRAV19A0A0A6YYK7 116 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 FAM240BA0A1B0GVZ2 78 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 CHST10O43529 356 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 MAGP20916 626 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 TUFMP49411 452 aaKnown RBP12.46□□□□□ -0.41
HCFC1-202ENST00000369984 DSELQ8IZU8 1212 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 TMEM86AQ8N2M4 240 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 POLR3HQ9Y535 204 aaPredicted RBP12.46□□□□□ -0.41
HCFC1-202ENST00000369984 SLITRK3O94933 977 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 ABRQ12979 859 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 ALKBH2Q6NS38 261 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 TMPRSS11AQ6ZMR5 421 aa12.46□□□□□ -0.41
HCFC1-202ENST00000369984 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.46□□□□□ -0.41
HCFC1-202ENST00000369984 DIP2AQ14689 1571 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 WRBO00258 174 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 NRP2O60462 931 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 MSL3P1P0C860 447 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 DEFA5Q01523 94 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 DENND1CQ8IV53 801 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 RBM4BQ9BQ04 359 aaKnown RBP12.46□□□□□ -0.42
HCFC1-202ENST00000369984 RBM4Q9BWF3 364 aaKnown RBP12.46□□□□□ -0.42
HCFC1-202ENST00000369984 SAMD4AQ9UPU9 718 aaKnown RBP12.46□□□□□ -0.42
HCFC1-202ENST00000369984 OPLAHO14841 1288 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 AP2A2O94973 939 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 ITGA2BP08514 1039 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 CTSKP43235 329 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 RARRES1P49788 294 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 TUBA3CQ13748 450 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 SYNPOQ8N3V7 929 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 WNT8BQ93098 351 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 DGCR14Q96DF8 476 aaKnown RBP12.46□□□□□ -0.42
HCFC1-202ENST00000369984 ACE2Q9BYF1 805 aaPredicted RBP12.46□□□□□ -0.42
HCFC1-202ENST00000369984 ZYG11BQ9C0D3 744 aa12.46□□□□□ -0.42
HCFC1-202ENST00000369984 MAGEA12P43365 314 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 MFSD10Q14728 455 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 PLET1Q6UQ28 207 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 ADAMTSL2Q86TH1 951 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 MED28Q9H204 178 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 CARD8Q9Y2G2 431 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 TMX2Q9Y320 296 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 UMODL1Q5DID0 1318 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 RSL1D1O76021 490 aaKnown RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 ABHD2P08910 425 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 THRBP10828 461 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 IFI30P13284 250 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 ENPEPQ07075 957 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 BSNDQ8WZ55 320 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 LINGO1Q96FE5 620 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 RIOX1Q9H6W3 641 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 USP20Q9Y2K6 914 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 NWD1Q149M9 1564 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 FRMPD4Q14CM0 1322 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 MSX2P35548 267 aaPredicted RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 ZNF143P52747 638 aaPredicted RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 TMEM119Q4V9L6 283 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 C6orf52Q5T4I8 152 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 FERD3LQ96RJ6 166 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 CHCHD6Q9BRQ6 235 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 H3BNH8 94 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 GMFGO60234 142 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 PRH1P02810 166 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 NELFEP18615 380 aaKnown RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 CDH5P33151 784 aaPredicted RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 S100A12P80511 92 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 IQSEC1Q6DN90 963 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 SLC30A10Q6XR72 485 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 JAZF1Q86VZ6 243 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 TBC1D21Q8IYX1 336 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 MFHAS1Q9Y4C4 1052 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 FAM172BPA6NC97 362 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 PIAS1O75925 651 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 RECQL4O94761 1208 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 SEPHS1P49903 392 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 ANKRD26P1Q6NSI1 321 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 TUBA3EQ6PEY2 450 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 CYP2W1Q8TAV3 490 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 CXorf40BQ96DE9 158 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 IGFLR1Q9H665 355 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 FAM86C2PA6NEL3 165 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 BCKDKO14874 412 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 PSMA1P25786 263 aaKnown RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 CAV3P56539 151 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 AP3S2P59780 193 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 CYP4F8P98187 520 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 USP4Q13107 963 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 SPON1Q9HCB6 807 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 TMPRSS4Q9NRS4 437 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 ATP6AP2A0A1C7CYW4 349 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 OR14I1A6ND48 311 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 ATP6AP2O75787 350 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 KDM4BO94953 1096 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 SAGP10523 405 aaPredicted RBP12.45□□□□□ -0.42
HCFC1-202ENST00000369984 IGFALSP35858 605 aa12.45□□□□□ -0.42
HCFC1-202ENST00000369984 MAZP56270 477 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms