RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 LRRN4CLQ8ND94 238 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 FAM174AQ8TBP5 190 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 FUBP1Q96AE4 644 aaKnown RBP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 FSD1LQ9BXM9 530 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 ERVMER34-1Q9H9K5 563 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 TTC7AQ9ULT0 858 aaPredicted RBP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 KNL1Q8NG31 2342 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 TDRD6O60522 2096 aaKnown RBP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 BPTFQ12830 3046 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 SPTY2D1-AS1A0A0U1RR47 76 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 USP12O75317 370 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 IFNB1P01574 187 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 CCT8P50990 548 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 BNIP3Q12983 259 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 PRPSAP1Q14558 356 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 PARP6Q2NL67 630 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 P3H1Q32P28 736 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 DRICH1Q6PGQ1 229 aaPredicted RBP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 GATAD2AQ86YP4 633 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 SCAMP4Q969E2 229 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 CAPZA3Q96KX2 299 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 APOOQ9BUR5 198 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 CARD6Q9BX69 1037 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 AP1M1Q9BXS5 423 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 ABCG8Q9H221 673 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 MAGEE1Q9HCI5 957 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 KLF15Q9UIH9 416 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 MRFAP1Q9Y605 127 aa15.06■□□□□ 0
SMPDL3A-201ENST00000368440 V9GYY5 206 aaPredicted RBP15.06■□□□□ 0
SMPDL3A-201ENST00000368440 DCDC2BA2VCK2 349 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 SDC3O75056 442 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 EPOP01588 193 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 ZSCAN5DPP0CG00 497 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 ZNF883P0CG24 379 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 HLA-DPA1P20036 260 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 STIP1P31948 543 aaKnown RBP15.05■□□□□ -0
SMPDL3A-201ENST00000368440 YPEL5P62699 121 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 EIF2B5Q13144 721 aaKnown RBP15.05■□□□□ -0
SMPDL3A-201ENST00000368440 KCTD16Q68DU8 428 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 KCTD11Q693B1 232 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 CCDC70Q6NSX1 233 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 PNCKQ6P2M8 343 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 RANBP10Q6VN20 620 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 MYRIPQ8NFW9 859 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 CAMK1GQ96NX5 476 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 AGAP2Q99490 1192 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 RTKNQ9BST9 563 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 LGR4Q9BXB1 951 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 L2HGDHQ9H9P8 463 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 ZFYVE1Q9HBF4 777 aa15.05■□□□□ -0
SMPDL3A-201ENST00000368440 AAR2Q9Y312 384 aaKnown RBP15.05■□□□□ -0
SMPDL3A-201ENST00000368440 GOLGA6CA6NDK9 693 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 GOLGA6BA6NDN3 693 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 PGRMC1O00264 195 aaKnown RBP15.04■□□□□ -0
SMPDL3A-201ENST00000368440 SOD1P00441 154 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 GOLGA6DP0CG33 693 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 EPHA8P29322 1005 aaPredicted RBP15.04■□□□□ -0
SMPDL3A-201ENST00000368440 ID4P47928 161 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 THOP1P52888 689 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 TTC27Q6P3X3 843 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 DCP2Q8IU60 420 aaKnown RBP15.04■□□□□ -0
SMPDL3A-201ENST00000368440 DNAJC28Q9NX36 388 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 GOLGA6AQ9NYA3 693 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 DRG1Q9Y295 367 aaKnown RBP15.04■□□□□ -0
SMPDL3A-201ENST00000368440 BTBD3Q9Y2F9 522 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 ZNF106Q9H2Y7 1883 aaKnown RBP15.04■□□□□ -0
SMPDL3A-201ENST00000368440 SPTBN4Q9H254 2564 aa15.04■□□□□ -0
SMPDL3A-201ENST00000368440 CES2O00748 559 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 SH3BP5O60239 455 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 SLU7O95391 586 aaKnown RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 FGF1P05230 155 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TRIM23P36406 574 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 RXRGP48443 463 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 SPINT3P49223 89 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 SLC14A1Q13336 389 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 NFATC4Q14934 902 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 PAPD7Q5XG87 772 aaKnown RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 RAET1GQ6H3X3 334 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 DENND5AQ6IQ26 1287 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 MACC1Q6ZN28 852 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TMC3Q7Z5M5 1100 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 PIP4P1Q86T03 277 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 PARGQ86W56 976 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TTC30BQ8N4P2 665 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 OXR1Q8N573 874 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 PDCD7Q8N8D1 485 aaKnown RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 MNS1Q8NEH6 495 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 ACTRT1Q8TDG2 376 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 BLOC1S5Q8TDH9 187 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 SAP25Q8TEE9 199 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 AP2M1Q96CW1 435 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TBL1YQ9BQ87 522 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 RIOK2Q9BVS4 552 aaKnown RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 GPR63Q9BZJ6 419 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TCEAL2Q9H3H9 227 aaPredicted RBP15.03■□□□□ -0
SMPDL3A-201ENST00000368440 CDC23Q9UJX2 597 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 SAR1BQ9Y6B6 198 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 DFNA5O60443 496 aa15.03■□□□□ -0
SMPDL3A-201ENST00000368440 TSHRP16473 764 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms