RNA–Protein interactions for RNA: ENST00000365559.1

RNU4-48P-201, Transcript of RNA, U4 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU4-48P, Length 182 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-48P-201ENST00000365559 HNRNPH2P55795 449 aaKnown RBP3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 POU5F1BQ06416 359 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 SLC20A2Q08357 652 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 TSTQ16762 297 aaKnown RBP3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 USP41Q3LFD5 358 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF718Q3SXZ3 478 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 C6orf141Q5SZD1 244 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 GGNBP1Q5YKI7 109 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 TSSK4Q6SA08 328 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 CCNI2Q6ZMN8 369 aaPredicted RBP3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 ODF3L1Q8IXM7 274 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF34Q8IZ26 560 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 NEK9Q8TD19 979 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 DUSP19Q8WTR2 217 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 RFFLQ8WZ73 363 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 FIG4Q92562 907 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 PERPQ96FX8 193 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM19Q96HH6 336 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 GRAMD2BQ96HH9 432 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 SH3GL2Q99962 352 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 SLC26A6Q9BXS9 759 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 IFIH1Q9BYX4 1025 aaKnown RBP3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 KCNG2Q9UJ96 466 aa3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 TTC7AQ9ULT0 858 aaPredicted RBP3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 PDS5AQ29RF7 1337 aaKnown RBP3.19□□□□□ -1.9
RNU4-48P-201ENST00000365559 TCF20Q9UGU0 1960 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 IGHV4OR15-8A0A075B7B6 117 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 A0A0G2JPF8 293 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 EIF3CLB5ME19 914 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 HNRNPCL3B7ZW38 293 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 J3KRW8 73 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 BUB3O43684 328 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 HNRNPCL1O60812 293 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 PAGE4O60829 102 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TIPRLO75663 272 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 NKX2-2O95096 273 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 RTN3O95197 1032 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TBX18O95935 607 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 HNRNPCL4P0DMR1 293 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 DDX5P17844 614 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 KRT9P35527 623 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 CLCNKAP51800 687 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 DLX5P56178 289 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 RPL7AP62424 266 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 OLR1P78380 273 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 MPP1Q00013 466 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 CEBPZQ03701 1054 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TBX2Q13207 712 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 OLIG2Q13516 323 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 FRG1Q14331 258 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TBCEQ15813 527 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF672Q499Z4 452 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 WBP2NLQ6ICG8 309 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF280DQ6N043 979 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 RGMBQ6NW40 437 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 DUS1LQ6P1R4 473 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 KCTD18Q6PI47 426 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 UNQ6126/PRO20091Q6UXV3 157 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 KRBA2Q6ZNG9 492 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TUBA1AQ71U36 451 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF771Q7L3S4 317 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 DIS3L2Q8IYB7 885 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 RFLNBQ8N5W9 214 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 POC1AQ8NBT0 407 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 IGSF8Q969P0 613 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 INTS12Q96CB8 462 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 RHBDF1Q96CC6 855 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 MMABQ96EY8 250 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 PCYT2Q99447 389 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 CMKLR1Q99788 373 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TUBA1CQ9BQE3 449 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TMEM47Q9BQJ4 181 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 STRA6Q9BX79 667 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 CSTL1Q9H114 145 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 RANBP17Q9H2T7 1088 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 EBF2Q9HAK2 575 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 SEBOXQ9HB31 216 aaPredicted RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 PCDH9Q9HC56 1237 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 MCM9Q9NXL9 1143 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 DONSONQ9NYP3 566 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 CNOT8Q9UFF9 292 aaKnown RBP3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 TAF1P21675 1872 aa3.18□□□□□ -1.9
RNU4-48P-201ENST00000365559 A0A1W2PQF6 199 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 B4E171 279 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 AKR1B15C9JRZ8 316 aaPredicted RBP3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 LDB3O75112 727 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF432O94892 652 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CD4P01730 458 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CLEC3BP05452 202 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 SPARCP09486 303 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 KRT10P13645 584 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 HLA-DOBP13765 273 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF182P17025 639 aaPredicted RBP3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 S1PR1P21453 382 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 TSPAN7P41732 249 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 FUT6P51993 359 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 ZNF132P52740 706 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 F2RL1P55085 397 aa3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 RELQ04864 619 aaPredicted RBP3.17□□□□□ -1.9
RNU4-48P-201ENST00000365559 CCNG2Q16589 344 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms