RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ATG13O75143 517 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 ALDH1A2O94788 518 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 CLDN7O95471 211 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 DNTTP04053 509 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 SHBGP04278 402 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 ZNF30P17039 623 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 EIF3BP55884 814 aaKnown RBP20.63■□□□□ 0.89
SHISA4-201ENST00000362011 ACVR1Q04771 509 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 CSTF1Q05048 431 aaKnown RBP20.63■□□□□ 0.89
SHISA4-201ENST00000362011 IFFO1Q0D2I5 559 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 CCDC15Q0P6D6 951 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 CNGA3Q16281 694 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 CDKN3Q16667 212 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 RSPO4Q2I0M5 234 aaPredicted RBP20.63■□□□□ 0.89
SHISA4-201ENST00000362011 KLHL38Q2WGJ6 581 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 TRMT10BQ6PF06 316 aaKnown RBP20.63■□□□□ 0.89
SHISA4-201ENST00000362011 LRIG3Q6UXM1 1119 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 TMEM92Q6UXU6 159 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 CYS1Q717R9 158 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 DPPA4Q7L190 304 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 TSPAN33Q86UF1 283 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 CACUL1Q86Y37 369 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 TMPRSS6Q8IU80 811 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 OR4K2Q8NGD2 314 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 OR13C4Q8NGS5 318 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 RAB7BQ96AH8 199 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 RUFY1Q96T51 708 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 MKRN2Q9H000 416 aaKnown RBP20.63■□□□□ 0.89
SHISA4-201ENST00000362011 ACBD3Q9H3P7 528 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 POLMQ9NP87 494 aaPredicted RBP20.63■□□□□ 0.89
SHISA4-201ENST00000362011 MOCS1Q9NZB8 636 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 SCML1Q9UN30 329 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 NCOR2Q9Y618 2525 aa20.63■□□□□ 0.89
SHISA4-201ENST00000362011 A0A0U1RQS6 177 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 A8MX80 341 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 PLK4O00444 970 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 MAP2K7O14733 419 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 RPP40O75818 363 aaKnown RBP20.62■□□□□ 0.89
SHISA4-201ENST00000362011 PSMA3P25788 255 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 DRD3P35462 400 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 HMGCLP35914 325 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 MMP12P39900 470 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 HADHAP40939 763 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 P2RY2P41231 377 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 PRAMEP78395 509 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 TMPRSS15P98073 1019 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 SEMG2Q02383 582 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 MGAT5Q09328 741 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 CNTN1Q12860 1018 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 CRY1Q16526 586 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 LRRC66Q68CR7 880 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 PDPK2PQ6A1A2 396 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 ZNF449Q6P9G9 518 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 SYT13Q7L8C5 426 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 KCNMB4Q86W47 210 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 HDDC3Q8N4P3 179 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 AADATQ8N5Z0 425 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 OR13J1Q8NGT2 312 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 OR2W6PQ8NHA6 318 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 CYTH2Q99418 400 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 C19orf43Q9BQ61 176 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 C20orf96Q9NUD7 363 aaPredicted RBP20.62■□□□□ 0.89
SHISA4-201ENST00000362011 IL17CQ9P0M4 197 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 PLXND1Q9Y4D7 1925 aa20.62■□□□□ 0.89
SHISA4-201ENST00000362011 EXOC1LA0A1B0GW35 172 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 TCRBV21S2A2A0A5A6 115 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 FAM159BA6NKW6 160 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 IVLP07476 585 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 C7P10643 843 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 TDGF1P13385 188 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 TGM1P22735 817 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 LHCGRP22888 699 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 ZBTB16Q05516 673 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 RALGDSQ12967 914 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 PTPRCAPQ14761 206 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 TTC31Q49AM3 519 aaPredicted RBP20.61■□□□□ 0.89
SHISA4-201ENST00000362011 PIP5KL1Q5T9C9 394 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 RASSF3Q86WH2 238 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 UNC5BQ8IZJ1 945 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 CEP192Q8TEP8 1941 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 CDKL2Q92772 493 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 HDAC10Q969S8 669 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 SIPA1Q96FS4 1042 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 OMDQ99983 421 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 FAM126AQ9BYI3 521 aaPredicted RBP20.61■□□□□ 0.89
SHISA4-201ENST00000362011 SLC6A17Q9H1V8 727 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 PPANQ9NQ55 473 aaKnown RBP20.61■□□□□ 0.89
SHISA4-201ENST00000362011 NFS1Q9Y697 457 aa20.61■□□□□ 0.89
SHISA4-201ENST00000362011 A0A1W2PP55 124 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 SLC7A4O43246 635 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 SASH3O75995 380 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 VAPBO95292 243 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 SDHBP21912 280 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 ARSDP51689 593 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 DGKEP52429 567 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 STC1P52823 247 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 SFSWAPQ12872 951 aaKnown RBP20.6■□□□□ 0.89
SHISA4-201ENST00000362011 NAB1Q13506 487 aa20.6■□□□□ 0.89
SHISA4-201ENST00000362011 EFTUD2Q15029 972 aaKnown RBP eCLIP20.6■□□□□ 0.89
SHISA4-201ENST00000362011 KBTBD12Q3ZCT8 623 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms